|
Name : join (Shew185_4400) Accession : YP_001355421.1 Strain : Genome accession: NC_009661 Putative virulence/resistance : Unknown Product : transposase IS3/IS911 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 15141 - 16318 bp Length : 1178 bp Strand : - Note : PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4292 transposase IS3/IS911 family protein DNA sequence : ATGAGATCGACAACCAGAAAAACATTTAGTGCTGAATTCAAACTTGAAGCAGCCCAATTAGTCCTTGATAAAAACCATAG CATCATCGAAGCTGCAAAGGCGATGAACGTAGGTAAATCCACTATGGATAAATGGGTGAGACAGTTAAAACTAGAACGCC AGGGTGGCACACCAAAAGCATCTCCGATTACCCCTGAACAAATTGAAATCCGTGAGCTGAAGAAGCAAATAGCTCGTCTT GAGGAGCACAATCTTATCCTAAAAAAGGCTACCGCTCTCTTGATGTCAGACTCGATGAACAATTTACGCTAATCAGCGCA CTCAAGCAGAGCCACTCTATTCTCACAATTTGTAATGCATTCAAAGTGCATCGAAGTAGCTATAAGTATTGGCTAAAAAG AAAAGAAAATATTGATGCAGACTTTACTATTTTATGCAGTGAAGTGAAGGCCGCACATCGTATTAGTCATGGCTCTGCCG GTGCTCGAACGATAGCGCAATTAGTGACTAACAAAGGGATTGGCCTCAGTCGTTATCGAGCCCGTAATCTAATGAAAAAG CTTGGGTTATTAAGCTGTCAGCAGCCTAAGCATTCTTATCGGAAAGCGACACAAGAGCATGTTGCAATCCCCAATACGCT TAATCGACAGTTTGCAGTAACTCAACCAGATCAAGTGTGGTGTGGCGACGTGACGTATGTTTGGGTCGGTAATCGTTGGG CCTATCTAGCCGTTGTTTTAGACTTATTTTCCCGCAAACCTGTTGGATGGGCTTTGTCATTATCACCAGATAGTGAGCTG ACCTGTAAAGCTTTGAAAATGGCATTTGAGTTAAGGGGTAAGCCTGAGAATGTGATATATCACAGCGATCAAGGTTCGCA TTACACAAGCTTGAAATTCAGACAATTAATATGGCGTCTTCAGATTGAGCAAAGTATGAGTCGCCGCGGGAATTGTTGGG ATAACGCACCAATGGAGCGTTTCTTTAGAAGTTTGAAATCTGAGTGGATACCCGCCAGTGGTTATGGGAATTTTACAGAA GCAGATAAAGAGATCACAAATTACATCACTGGATATTACAGTGAGACCAGACCCCATCAATATAATGGTGGGTTAACGCC AAATGAGTCAGAACGTTTATATTGGAATGACTCTAAAACCGTGGCCAATTTTACTTGA Protein sequence : MRSTTRKTFSAEFKLEAAQLVLDKNHSIIEAAKAMNVGKSTMDKWVRQLKLERQGGTPKASPITPEQIEIRELKKQIARL EEHNLILKKGYRSLDVRLDEQFTLISALKQSHSILTICNAFKVHRSSYKYWLKRKENIDADFTILCSEVKAAHRISHGSA GARTIAQLVTNKGIGLSRYRARNLMKKLGLLSCQQPKHSYRKATQEHVAIPNTLNRQFAVTQPDQVWCGDVTYVWVGNRW AYLAVVLDLFSRKPVGWALSLSPDSELTCKALKMAFELRGKPENVIYHSDQGSHYTSLKFRQLIWRLQIEQSMSRRGNCW DNAPMERFFRSLKSEWIPASGYGNFTEADKEITNYITGYYSETRPHQYNGGLTPNESERLYWNDSKTVANFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 4e-102 | 69 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 4e-102 | 69 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 4e-102 | 69 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 5e-102 | 69 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 5e-102 | 69 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 4e-102 | 69 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 4e-102 | 69 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 4e-102 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| join | YP_001355421.1 | transposase IS3/IS911 family protein | VFG1122 | Protein | 2e-102 | 69 |
