Gene Information

Name : mma_0961 (mma_0961)
Accession : YP_001352651.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1085666 - 1086571 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
ATGTCCAAAATCAAGGCCTCCAGCAAGGTAAGGCAAGCATATAAATTTATTGAATCGCATCGTGACGAATTCAGTGTAAT
CAGCATGTGCCAGGCTCTCGATGTTGAACGATCAGGTTACTACGCGTGGTTGAAGAATCCCTTGTCTGATCGCGCACAGG
AAGATGCTCGGCTTCTTAAGCTGATCAGAGCATCCTTCATGGCAAGTCATGGCATCTATGGTGCCCCGAGAGTCTTCCAA
GATCTAAGGGAGCGCGGGGAACTATGCAGTAAGCACAGAGTAGCCCGTCTTATGCGAGAAAATGGGTTGCGAGCGCTGCA
TGGCTATCGCATACGGCATATACCCGTCTCAAAGCCATCACCACTGATCCCCAATTTACTCCAACGGCAATTTACGGTTA
CGCGGCCAAACGAAGCATGGGTAACTGACATTACCTATATCCGAACGTGGCAGGGCTGGCTTTATCTCGCCGTGGTGATG
GATTTATTCTCAAGAAAGGTCGTTGGCTGGGCTGTTCGACCTACCATTCATCGCGAATTAGTACTCGATGCCATTGCCAA
AGCAGTGCGCAGCCGCCGCCCTCGCCATACCTTGATTCATTCAGACCAAGGAACGCAATACGGCAGCGACGCCTGGCGAC
GGTTCTGCAAGGCTAATCATCTGGAGCCGAGTATGAGTCGGCGGGCAAATTGCTGGGATAACGCAGTGGTAGAGTCCTTC
TTCAGCAGTTTAAAGAAAGAGCGCGTCAAAAAGCACATTTATGCTGATCGCGAAACCGCTACACTGGACCTAGCCGAATA
CATTGATGACTTCTACAATGGGGTAAGACGACACAGTCATCTTGGTGGTGTCAGTCCGAATACGTTTGAAACCGCACATC
GTAGACGGAAATCAGCTGTCTACTAA

Protein sequence :
MSKIKASSKVRQAYKFIESHRDEFSVISMCQALDVERSGYYAWLKNPLSDRAQEDARLLKLIRASFMASHGIYGAPRVFQ
DLRERGELCSKHRVARLMRENGLRALHGYRIRHIPVSKPSPLIPNLLQRQFTVTRPNEAWVTDITYIRTWQGWLYLAVVM
DLFSRKVVGWAVRPTIHRELVLDAIAKAVRSRRPRHTLIHSDQGTQYGSDAWRRFCKANHLEPSMSRRANCWDNAVVESF
FSSLKKERVKKHIYADRETATLDLAEYIDDFYNGVRRHSHLGGVSPNTFETAHRRRKSAVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-37 45
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-37 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-44 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-44 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-44 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-44 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-40 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-40 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-39 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-44 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-44 41
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-44 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mma_0961 YP_001352651.1 transposase VFG1706 Protein 6e-45 42