|
Name : thiC (mma_0384) Accession : YP_001352074.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 424278 - 426191 bp Length : 1914 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCCAATCCCAAATTCCTGTCCGCCACAGCGACAGTAGACGAAGCATCAATCCAGCCGCTGCCAAATTCCCGCAA AATTTATATCGAAGGTTCGCGTCCCGACATCCGCGTGCCTATGCGTGAGATTACGCAATCCGATACGGCAGCTTCGTTCG GTTTTGAAAAGAACCCGCCGATCTATGTGTATGACACCTCGGGTCCTTACACTGATCCTGCGGCCAAGATCGATATTCGT TCCGGCCTGGACACGCCGCGCCTGCCGTGGATACTCGAACGCAATGACACGGAAGAACTGCCTGGACCGACTTCGGAATA CGGCATAGAGCGCCTGAACGATCCGAAGCTGGCCGAATTGCGCTTCAACCTGCACCGCAAGCCGCGTCGCGCGCTTGCCG GCAAAAACGTTTCGCAGATGCATTACGCGCGGCAAGGCATCATCACGCCGGAAATGGAATTCGTCGCGATCCGCGAAAAC ATGAACCGCCGCGCCTACCTGGAAGAGTTGAAAAAGTCCGGTCCTAAAGGCGAGAAATTGGCCGAATTGATGGGGCGTCA ACACCCAGGGCAGTCATTCGGTGCAGCTATTCCGCAAGAGATCACCGCTGAATTTGTGCGCAGTGAAATCGCGCGCGGTC GCGCCATCATTCCTGCCAATATCAATCATCCGGAAATCGAACCGATGATCATAGGCCGCAATTTCCTGGTCAAGATCAAC GCCAATATCGGCAACTCTGCAGTGACTTCTTCCATTGGTGAAGAAGTCGAGAAAATGACCTGGGCGATACGCTGGGGTGG CGACAACGTGATGGATTTGTCGACCGGCAAACATATCCATGAAACACGCGAATGGATCATCCGTAACTCGCCAGTACCTA TCGGTACCGTACCGATTTACCAGGCACTGGAAAAAGTAAATGGCAAGGCGGAAGACCTGACCTGGGAAATTTTCCGCGAT ACGCTGATTGAGCAAGCGGAACAGGGCGTTGATTACTTCACCATCCACGCCGGTGTCTTGCTGCGCTATGTGCCGATGAC GGCGAAGCGCATGACCGGTATTGTGTCGCGTGGCGGTTCCATCATGGCCAAATGGTGTCTCGCGCATCACAAGGAATCAT TCCTGTACGAGCATTTCGAAGACATTTGCGAAATCATGAAAGCCTATGACGTGTCCTTCAGCCTGGGTGATGGCTTGCGT CCGGGTTCCATTTACGATGCGAATGATGAAGCGCAACTCGGTGAATTGAAAACGCTGGGTGAGCTGACGCAGATTGCATG GAAGCATGATGTGCAAGTGATGATCGAAGGTCCGGGGCACGTACCTATGCACCTGATCAAGGAAAACATGGACTTGCAAC TGGAACAATGCCATGAAGCGCCGTTCTATACGCTGGGGCCGTTGACGACCGATATTGCACCAGGCTACGACCACATCACT TCCGGCATCGGTGCGGCGCAGATCGGCTGGTATGGCACCGCGATGCTTTGCTATGTCACGCCGAAAGAGCATCTCGGTTT GCCGAACAAGGTCGACGTCAAGGACGGCATCATCACTTATAAAATCGCCGCGCATGCCGCCGATCTGGCGAAAGGTCATA TCGGTGCACAAATTCGCGACAATGCCTTGTCGAAAGCGCGTTTCGAATTCCGCTGGGAAGACCAGTTCAATATCGGGCTG GATCCGGACAAGGCACGTGAATTCCACGATGAAACCCTACCCAAGGATTCGGCCAAGGTCGCCCACTTCTGTTCGATGTG CGGCCCGCATTTCTGTTCGATGAAAATTACACAGGAAGTGCGTGACTATGCAGCGAAGCAGGGCATTACGGAAATCCAGG CTTTGAAAGCAGGGATGGAAGTGAAGGCGATCGAGTTCGTGAAAAGCGGTTCCGAGATCTATCAGAAGCAATGA Protein sequence : MNANPKFLSATATVDEASIQPLPNSRKIYIEGSRPDIRVPMREITQSDTAASFGFEKNPPIYVYDTSGPYTDPAAKIDIR SGLDTPRLPWILERNDTEELPGPTSEYGIERLNDPKLAELRFNLHRKPRRALAGKNVSQMHYARQGIITPEMEFVAIREN MNRRAYLEELKKSGPKGEKLAELMGRQHPGQSFGAAIPQEITAEFVRSEIARGRAIIPANINHPEIEPMIIGRNFLVKIN ANIGNSAVTSSIGEEVEKMTWAIRWGGDNVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRD TLIEQAEQGVDYFTIHAGVLLRYVPMTAKRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFSLGDGLR PGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCHEAPFYTLGPLTTDIAPGYDHIT SGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGIITYKIAAHAADLAKGHIGAQIRDNALSKARFEFRWEDQFNIGL DPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQEVRDYAAKQGITEIQALKAGMEVKAIEFVKSGSEIYQKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 74 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 74 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
