Gene Information

Name : mma_3673 (mma_3673)
Accession : YP_001355363.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : sigma-54 dependent response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 4078382 - 4079827 bp
Length : 1446 bp
Strand : +
Note : -

DNA sequence : 
ATGGGTTATAAGAAAAAGATATCCATAGTTCGTGGTTTATCCCGCATAGAAATCAATATGAGCGCTGTAACTCCTGTTAA
CAACCCGGAAGAACCCTTCGTCGAAGCATTTGGCGGCTGGCAAGAACGCTCCATCCTGATCGTGGACGATGAGCCCGGCA
TGCGCAGCTTTTTGCAACGCACGCTGGTGGGCCGTTGCAGTCGCGTCGAAGCAGTGGACTCGGTGGAGGCCGCCAATGTT
CTATTGGGGCAGCAGCATTTCGACCTGATCATTCTGGATAACTCCCTGCCCGGCAAATCAGGCGTTGACTGGTTGCAGGA
GATACGCGAACTCGGCTTGCATAATGACGTGGTCCTGATCACGGCCTTTGCCGATCTGGAAACAGCGATCCGTGCCTTAC
GCGCCGGTGCTGCCGATTTCCTGCTCAAGCCGTTCCGCGTCAACCAGATACTGAGTGCGATAGGCCGTTGCTTTGACCGC
GCCCACTTGCGACGTGAAAACTTCATCCTGCGCCGTGAACTGGATTCGCATATCGACCTGGCCGGCGTGGAAGGATTGGT
CGGAGCTTCTGCGGCACTGGAGCCGATACGGGAAGCGATCAAGCGCCTCGCTACCGTACCGAGTACGGTATTGATTACCG
GTGAGTCCGGTACCGGCAAGGAAATCGCCGCGCGGGCGATGCATAAACTCAGCAATCGCTCGCACAACCATTTCGTTCCG
ATCAATTGCGGCGCGGTGGCACCAGACATCATCGAAAGTGAATTATTCGGCCATATCAAGGGCGCTTTCAGCGGCGCGGC
ATCATCGCGCGAAGGCCTGTTCTTTTATGCACAGGGTGGCACCCTCTTCCTTGATGAAGTCGCCGAACTGCCGCTGGCGA
TGCAAGTCAAACTGCTGCGCGTACTGGAAGAAAAAAGAATCCGCCCGGTCGGTGCCGAACGTGAAATACCGGTCGATGTG
CGTGTCATTGCGGCGACCAATCGCAATGTGGAAGAGGCGGTGCAGGAAGGTCGCTTCCGGCAGGATCTTTATTACCGGCT
GAATGTAGTGCAACTGCATATGCCGCCCTTGCGTGAACGTACGGAAGACATCCCGGCACTGGCAGAATACTTCGTGCGGC
AACTGGCCCAGCAACTGGGCGTGCCGGCGAAGAAGCCGGACAGCGCGCTCTTCGCATCACTCGCCGGATATAGTTGGCCA
GGTAATGTACGCGAATTGCGCAACCTGATAGAACGCTGGCTGATACTCGGCAATATCTCCGACGTCACAGCTGCAAACAA
TACGGGCAGCACGACCACGAATGGTGATGTCACGCTGGAAGCCGTCGAGAAACAACACATCCTGAAGATACTGGCCGAAG
TCGGCGGCAACAAGACGGAGGCCGGGCGTCGTCTCGGTATTTCACGCAAGACCCTCGAGCGTAAATGCGCCGAGTGGGGC
GTATAG

Protein sequence : 
MGYKKKISIVRGLSRIEINMSAVTPVNNPEEPFVEAFGGWQERSILIVDDEPGMRSFLQRTLVGRCSRVEAVDSVEAANV
LLGQQHFDLIILDNSLPGKSGVDWLQEIRELGLHNDVVLITAFADLETAIRALRAGAADFLLKPFRVNQILSAIGRCFDR
AHLRRENFILRRELDSHIDLAGVEGLVGASAALEPIREAIKRLATVPSTVLITGESGTGKEIAARAMHKLSNRSHNHFVP
INCGAVAPDIIESELFGHIKGAFSGAASSREGLFFYAQGGTLFLDEVAELPLAMQVKLLRVLEEKRIRPVGAEREIPVDV
RVIAATNRNVEEAVQEGRFRQDLYYRLNVVQLHMPPLRERTEDIPALAEYFVRQLAQQLGVPAKKPDSALFASLAGYSWP
GNVRELRNLIERWLILGNISDVTAANNTGSTTTNGDVTLEAVEKQHILKILAEVGGNKTEAGRRLGISRKTLERKCAEWG
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-68 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-68 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mma_3673 YP_001355363.1 sigma-54 dependent response regulator BAC0467 Protein 2e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mma_3673 YP_001355363.1 sigma-54 dependent response regulator VFG1214 Protein 1e-72 46
mma_3673 YP_001355363.1 sigma-54 dependent response regulator VFG1249 Protein 7e-60 42