Gene Information

Name : ragA (mma_0289)
Accession : YP_001351979.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : two-components system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 328328 - 329068 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGCACCGCTGCCTGATCATTGAAGACGATACGCATAATGCGCTCTACATCGCCAAAGGGCTGAAGGAGATCGGCTATGA
GGCAACCGTCTGCGCGGATGGCATAGAGGGCATGGAACTGGCAGTTGGCGGCGAATGGGATGTGATCATCCTCGACCGCA
TGTTGCCGCAAGGAATGGACGGCTTGTCCATACTGGCTGCGCTGCGTGAAATGGGCAAGCGCACGCCGGTCCTGATCCTT
AGCGCGCTATCCGCCATTGATGAACGTGTACGCGGCCTGCAAGCCGGTTGTAATGATTACCTGACCAAGCCCTTTGCTTT
CCCGGAACTGGCGGCACGGGTCGAAGCGCTGCTGCGCTGGACCCAGCCGAATGAAGTGATACGTGAACTGTGCGTGGAAG
ACCTGAAGGTCAACCTGCTGACGCGCAGTGTTGAGCGCGGCGGACGTCCGCTCAGCCTGCAACCGCGGGAATTCCGCCTG
CTGGTCTACATGATGACGCACAAGGGCCAGGTATTGACCCGTACCATGTTGCTGGAATCGGTCTGGAATTATCAATTCGA
CCCGCAAACCAATGTCATAGACGCCCATATCAGCCGCTTGCGCAACAAGGTCGACAAGGGCTTTGCCGTGCCGCTGATAC
ATACGCGGCGCAACCTCGGCTATATCCTCACACCGAATCCGCAAACCGAGCCGGCTGACGATCACGGGCAGGCCAGGCAG
TCGCTCAAATCAGCGCCATGA

Protein sequence : 
MHRCLIIEDDTHNALYIAKGLKEIGYEATVCADGIEGMELAVGGEWDVIILDRMLPQGMDGLSILAALREMGKRTPVLIL
SALSAIDERVRGLQAGCNDYLTKPFAFPELAARVEALLRWTQPNEVIRELCVEDLKVNLLTRSVERGGRPLSLQPREFRL
LVYMMTHKGQVLTRTMLLESVWNYQFDPQTNVIDAHISRLRNKVDKGFAVPLIHTRRNLGYILTPNPQTEPADDHGQARQ
SLKSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-36 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_001351979.1 two-components system response regulator BAC0125 Protein 4e-45 45
ragA YP_001351979.1 two-components system response regulator BAC0111 Protein 1e-48 44
ragA YP_001351979.1 two-components system response regulator BAC0308 Protein 3e-44 43
ragA YP_001351979.1 two-components system response regulator BAC0347 Protein 1e-44 43
ragA YP_001351979.1 two-components system response regulator BAC0197 Protein 6e-42 42
ragA YP_001351979.1 two-components system response regulator BAC0083 Protein 4e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_001351979.1 two-components system response regulator VFG1389 Protein 3e-35 42
ragA YP_001351979.1 two-components system response regulator VFG0596 Protein 8e-37 41