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Name : gabD (mma_2905) Accession : YP_001354595.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3254852 - 3256324 bp Length : 1473 bp Strand : + Note : - DNA sequence : ATGTCGCATAGCGCCGCCTTACAGTTAAAAGACCCCACCATCCTGCGTAATCACGCATACATCAACGGGGCATGGGTAAC GGGCAAGGCCAGCTTCGATGTCAACAATCCGGCGGATGGCAGCAAAATTACCGATGTGCCCAACCTGGGCGCACAGGAAA CCGAACAAGCGATACAAGCCGCGCATGCAGCCTTCCCTGCCTGGGCCGCCAAAACCGGCAAGGAGCGCGCCGGTATCATG CGCATATGGTTCGATCTCATCATCGCGAATGCGGATGACCTCGCTGCACTCATGACGGCAGAGCAAGGCAAACCCCTGAT CGAATCGCGGGGCGAAGTGATTTACGGTGCCAGCTTTATCGAATGGTTTGCCGAAGAAGCCAAACGCGTCAGTGGCGATG TGATGGCATCCACCTGGAGCGATAAACGCACGGTCACCATCAAGCAGCCTATAGGCGTGTGCGCATCGATCACGCCATGG AATTTTCCGATCGCAATGATTACACGCAAGGTTGCACCGGCGATTGCCGCCGGGTGCACCATCGTGATCAAGCCGGCCGA GCAAACCCCGTTGTCGGCATTGGCAATTGCAGAACTGGCGCACCGTGCCGGTATTCCTCCTGGCGTTATCAATGTCGTAA CCTCAGATTCCGACCAATCAATCGCGGTCGGAAAAGTCCTGTGTTCCAGCCCTATCGTGCGCCATGTATCGTTCACCGGC TCGACGCCAGTGGGCCGCATCCTAATGGAACAATGCGCGCCTACCGTGAAGAAGATCGGCCTGGAACTCGGCGGCCACGC GCCCTTCATCGTCTTCGATGATGCCGATCTCGATGCGGCTGTTGTCGGAGCCTTGCAATCGAAGTATCGCAATGCCGGAC AAACCTGCGTCTGCACCAACCGCTTCTATGTACATGAATCAATTTACGATACCTTCGTGCAAAAACTCGGCGCAGGTGCG GCAAAAATCAAGGTCGGCAACGGCGTTGAACAGGGCGTATTGCAAGGACCACTGATCGATGCACAAGCGGTGAAGAAAGT GGAACAGCATGTCAGCGATGCCGTGAGCAAGGGGGCGAAGGTCATCACCGGCGGCAAGCAGCATGCATTGGGCGGTTATT TTTACGAACCTACCGTGCTGTCGAATATCAGCCCCGACATGCTGATCATGCATGAAGAAACCTTCGGCCCGGTTGCCGCC GTCATCAAATTCAAAACAGAAGATGAGGCAGTTGCCGCCGCCAACGATACCGACTTCGGCCTGGCCAGTTACTTCTACTC TCGTGATATAGGCCGTGTCTGGCGCGTTGCCGAAAAACTCGAATACGGCATGGTCGGCATCAACACCGGCCTGATTTCGA ATGAAGTCGCGCCCTTTGGCGGCGTCAAGCAATCAGGCCTGGGCCGTGAAGGTTCGAAATACGGAATAGAAGAGTATCTG GAAATCAAATACCTGTGCATGGGCGGGATCTGA Protein sequence : MSHSAALQLKDPTILRNHAYINGAWVTGKASFDVNNPADGSKITDVPNLGAQETEQAIQAAHAAFPAWAAKTGKERAGIM RIWFDLIIANADDLAALMTAEQGKPLIESRGEVIYGASFIEWFAEEAKRVSGDVMASTWSDKRTVTIKQPIGVCASITPW NFPIAMITRKVAPAIAAGCTIVIKPAEQTPLSALAIAELAHRAGIPPGVINVVTSDSDQSIAVGKVLCSSPIVRHVSFTG STPVGRILMEQCAPTVKKIGLELGGHAPFIVFDDADLDAAVVGALQSKYRNAGQTCVCTNRFYVHESIYDTFVQKLGAGA AKIKVGNGVEQGVLQGPLIDAQAVKKVEQHVSDAVSKGAKVITGGKQHALGGYFYEPTVLSNISPDMLIMHEETFGPVAA VIKFKTEDEAVAAANDTDFGLASYFYSRDIGRVWRVAEKLEYGMVGINTGLISNEVAPFGGVKQSGLGREGSKYGIEEYL EIKYLCMGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-134 | 63 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-71 | 41 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 1e-52 | 41 |
