Gene Information

Name : mma_0023 (mma_0023)
Accession : YP_001351713.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : two-components system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 33158 - 33841 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATCTTGTTGATCGAAGACGAAGTCAAGACGGTCGCCTACCTGCAGCGAGGCCTGACCGAGCAAGGTTGCATAGT
CGATGTTGCCAACAATGGCATCGACGGCCAGCATCTGGCCCTGACCGGCGACTATGACGCCATCGTGCTCGACATTATGT
TGCCCGGCCGCGACGGCATAGAAGTATTGCAAGCCTTGCGTCGCCAAAAGAGTACGCCGGTCATCATGCTGACGGCACGT
GGTGAAGTCGATGACCGCATCCATGGCTTGCAGACCGGTGCCGATGATTACCTGGTCAAGCCATTTTCCTTCCTCGAATT
GCTGGCGCGTTTGCAGGCGCTCGGACGCCGTGGTCGTCCACAAGAGTCAACACATATCCGCATTGCCGATTTGCATATCG
ACCTGATCGCACGACGTGCGATGCGGGGCGTGCGCCGGCTGGACCTGACTGCCAAAGAGTTTGCGCTGCTGGCGGCATTG
GCGCGCCATCGTGGGCAAGTGCTGTCGAAGACCGTCATCGTCGAAATGGTGTGGGACGTTAACTTCGAAAGCAATACCAA
TGTCGTCGAAGTAGCGATCAAGCGTTTGCGCGCCAAGCTCGATGAGCCATCCGAAGTCAAGCTCCTGCATACGATACGCG
GCATGGGTTACCTGCTGGAAGAACGCAGCGAGGCTGATGCATGA

Protein sequence :
MKILLIEDEVKTVAYLQRGLTEQGCIVDVANNGIDGQHLALTGDYDAIVLDIMLPGRDGIEVLQALRRQKSTPVIMLTAR
GEVDDRIHGLQTGADDYLVKPFSFLELLARLQALGRRGRPQESTHIRIADLHIDLIARRAMRGVRRLDLTAKEFALLAAL
ARHRGQVLSKTVIVEMVWDVNFESNTNVVEVAIKRLRAKLDEPSEVKLLHTIRGMGYLLEERSEADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-47 52
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-46 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mma_0023 YP_001351713.1 two-components system response regulator BAC0083 Protein 6e-51 57
mma_0023 YP_001351713.1 two-components system response regulator BAC0197 Protein 4e-54 56
mma_0023 YP_001351713.1 two-components system response regulator BAC0125 Protein 4e-57 55
mma_0023 YP_001351713.1 two-components system response regulator BAC0638 Protein 9e-46 53
mma_0023 YP_001351713.1 two-components system response regulator BAC0111 Protein 4e-52 52
mma_0023 YP_001351713.1 two-components system response regulator BAC0347 Protein 8e-48 50
mma_0023 YP_001351713.1 two-components system response regulator BAC0308 Protein 7e-46 49
mma_0023 YP_001351713.1 two-components system response regulator HE999704.1.gene1528. Protein 9e-32 42
mma_0023 YP_001351713.1 two-components system response regulator NC_002516.2.879194.p Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mma_0023 YP_001351713.1 two-components system response regulator VFG0596 Protein 1e-47 52
mma_0023 YP_001351713.1 two-components system response regulator VFG1389 Protein 2e-32 45
mma_0023 YP_001351713.1 two-components system response regulator VFG1390 Protein 5e-34 41