Gene Information

Name : wcaJ (mma_2255)
Accession : YP_001353945.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : lipopolysaccharide synthesis sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2525860 - 2526402 bp
Length : 543 bp
Strand : -
Note : -

DNA sequence : 
TTGGGTTTGGCCTTGCTGGCAGCGATCATATTGCTGCTGCCTATTGCGTTTATTGCATTTGTTGTTAAAATTACATCAAA
AGGGCCTGCGGTTTATTGGTCTGACAGGGTCGGGAAGCATAATAAAATCTTTAAAATGCCCAAGTTCAGAACCATGCAGG
TCGATACGCCAGCAGTGGCGACACATTTGTTGACTGATCCGCAACAGTTCCTGACGCCTATAGGATCATTTTTGCGCAAG
TCCAGTCTGGATGAACTTCCGCAGTTATGGAGTATCCTCAAAGGCGACATGAGTTTTGTCGGTCCGCGCCCGGCCTTGTT
CAATCAGGATGATCTGGTTGCTTTGCGCACACGCTTCGGCGTAGACAATATCAAGCCCGGATTGACTGGCTGGGCACAAA
TCAATGGCCGCGATGAATTGCCGATACCTGAAAAGGTTGCACTTGATGTTGAATATCTGAAACTCCAGTCATTCTGGTTT
GATATAAAAATCCTGGTTCTGACATTCCAAAAAGTATTAAAAAAAGACGGTATTACCCACTGA

Protein sequence : 
MGLALLAAIILLLPIAFIAFVVKITSKGPAVYWSDRVGKHNKIFKMPKFRTMQVDTPAVATHLLTDPQQFLTPIGSFLRK
SSLDELPQLWSILKGDMSFVGPRPALFNQDDLVALRTRFGVDNIKPGLTGWAQINGRDELPIPEKVALDVEYLKLQSFWF
DIKILVLTFQKVLKKDGITH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-32 52
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-31 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wcaJ YP_001353945.1 lipopolysaccharide synthesis sugar transferase VFG1369 Protein 2e-31 50
wcaJ YP_001353945.1 lipopolysaccharide synthesis sugar transferase VFG1309 Protein 2e-31 45