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Name : mma_2254 (mma_2254) Accession : YP_001353944.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerases Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2523874 - 2525853 bp Length : 1980 bp Strand : - Note : - DNA sequence : ATGAAATCATTTCTTGAATTACCACGGTTTCAGAAACAGCTGATAGCGGCTACCGCTGATCTGGTTCTATTGCCGTTGAC TTTTTACCTGGCAGTCTTGTTGCGCTATGACAGCAGCACGCCGCAATTGTTTGAGATGTATTTTTGGATGATTGTCGCTG CACCGCTTATTTCCATTCCTATATTCCTGCGGCTTGGTTTGTACCGGGCAGTGATTCGATTCATCGATCAAAAAATTGTA TATGTCGTTGTATTAGGGGTGTCCTTATCGGTTATCTGTATGGCTGCTCTTGCCACTTTTGCACATACCGCACCTTTATC ACGCGGGGTGTTTGGCATCTATTGGGTAAGTGCCATTTTGTATGTGGTTGCGAGTCGTTTCCTGGCGCGCGGGTATTTGC TTAGGGCCGATGACAGAGGTGGTAGCGCCGTACGTGTTGCCATTTATGGTGCCGGGCATTCCGGTATGCAACTGGCCAGC GCATTGCGAGCAGGACATGAATATCTGCCTGTCGCCTTAATCGACGATAAGAAAGAGTTGCACGGCGCGACCATAGCCGG TGTCAAGGTGTGGCCTTCCAGTGAGTTGCCGCGTTTGGTCGCGGAAAAACAGATCAAGGAAGTATTGCTGGCAATGCCTT CCTTGCGCAAGGCGCAGCAGAAACTGATTCTGGAGCAGCTTGAGCCTCTCAAGGTCAAAATCAAGGTAACCCCTCCCATT GCCAGTCTGGTTAATGGCGAACTGCGCGTTCAAGATATTCGTGATATTGAAATTGAGGATTTGCTTGGGCGGGATGCGGT AGAACCCGATATGCGCCTGCTGTCTACTTGTATTACCGGACGAACAGTGATGGTGACCGGTGCCGGCGGGTCGATCGGTT CGGAGTTGTGCAGGCAGATTATTCGTCTGGCGCCAAAGCGCTTGTTGCTGTTGGACATGTCGGAATTTGCGCTTTATTCG ATTGAGCAGGAACTGCAGGAAGTAAAAAGAACACAGAATGTGGACGTCCATGTCTTGCCTTTCCTCGGCTCGGTACTGGA ATCGGAAAAGTGTGAGCGTATTCTGCGGACATATTCTGTAGATACTATTTATCACGCGGCAGCCTATAAGCACGTTCCTT TGGTTGAGCATAATCCGATTCAGGGGATACGTAATAACGCGCTGGGAACCTTGTGCCTGGCACGGGCAGCAGTTGCCGCT GGGGTCGGCTGTTTTGTATTGATTTCTACCGACAAGGCAGTGCGTCCCACCAATGTCATGGGCGCAACCAAGCGGCTGGC GGAATTGATACTGCAGGCTTTCTCACGGAATCAGGATGGAACGCGATTTTGCATGGTACGTTTTGGCAATGTCTTGGGCT CATCCGGTTCGGTTGTGCCCCTCTTTCGCAAACAGATCATGTCGGGTGGCCCGATCACTCTGACCCATCCCGAAATTACA CGTTACTTCATGACTATTCCCGAGGCCGCACAACTTGTGCTGCAGGCCGGTGCGATGGGCGAAGGTGGCGATGTTTTCGT GCTGGATATGGGAGAGCCGGTCAAGATACTGGATCTGGCAACGCGCATGGTTCACTTAAGTGGTTTTGAAGTCCAAGGTG ACAGCGACTCGAGCGATACTATCGAGATTCAGCATGTCGGCTTAAGACCGGGTGAAAAACTTTACGAAGAATTGCTGATT GGTTCAAATGTCGAAGGTACTCAACATCCTTTGATCATGCGGGCGCAGGAGACAGAAATTCCTTGGGCAGATTTGCAAAA ACTATTGCTGGAGTTGGAAAGCGCATGCGACCGATTCGATTATGAAAAAGTCCGTGCTTTGTTGCTTCAAGCAGTTGTCG AATATGCGCCTCAATGCGGAATTGAAGATTTTCTTTGGCAAGAGAACACTAAATTTGCGGACGTGGTCGGCAACTCGGTT GCTGGTGTCAGTCTGCCACTCAAAACCCCTAAGCCCGACTTGAAGCAAGTCCTGAAGTAA Protein sequence : MKSFLELPRFQKQLIAATADLVLLPLTFYLAVLLRYDSSTPQLFEMYFWMIVAAPLISIPIFLRLGLYRAVIRFIDQKIV YVVVLGVSLSVICMAALATFAHTAPLSRGVFGIYWVSAILYVVASRFLARGYLLRADDRGGSAVRVAIYGAGHSGMQLAS ALRAGHEYLPVALIDDKKELHGATIAGVKVWPSSELPRLVAEKQIKEVLLAMPSLRKAQQKLILEQLEPLKVKIKVTPPI ASLVNGELRVQDIRDIEIEDLLGRDAVEPDMRLLSTCITGRTVMVTGAGGSIGSELCRQIIRLAPKRLLLLDMSEFALYS IEQELQEVKRTQNVDVHVLPFLGSVLESEKCERILRTYSVDTIYHAAAYKHVPLVEHNPIQGIRNNALGTLCLARAAVAA GVGCFVLISTDKAVRPTNVMGATKRLAELILQAFSRNQDGTRFCMVRFGNVLGSSGSVVPLFRKQIMSGGPITLTHPEIT RYFMTIPEAAQLVLQAGAMGEGGDVFVLDMGEPVKILDLATRMVHLSGFEVQGDSDSSDTIEIQHVGLRPGEKLYEELLI GSNVEGTQHPLIMRAQETEIPWADLQKLLLELESACDRFDYEKVRALLLQAVVEYAPQCGIEDFLWQENTKFADVVGNSV AGVSLPLKTPKPDLKQVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-80 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-82 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mma_2254 | YP_001353944.1 | nucleoside-diphosphate sugar epimerases | VFG0029 | Protein | 2e-131 | 51 |
| mma_2254 | YP_001353944.1 | nucleoside-diphosphate sugar epimerases | VFG1300 | Protein | 4e-77 | 44 |
