Gene Information

Name : fliP (mma_1431)
Accession : YP_001353121.1
Strain : Janthinobacterium sp. Marseille
Genome accession: NC_009659
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1618601 - 1619359 bp
Length : 759 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGGCCAATAATATTTCCCCACTGCTGCGCCGTGCGTTGCCGCTGCTGCTCCTGGCTTTGCCGGTTGCCGCGATGGCGCA
ACAAGCCGGCCTGCCCGCATTCACCAGCTCGCCGGCACCAGGCGGCGGCCAAACCTATTCACTCAGCCTGCAAACACTGC
TGCTGCTGACCGGGCTGTCCTTCCTGCCGGCCGTACTGCTGATGATGACCAGCTTCACCCGCATCATCATCGTGCTGTCG
CTGCTGCGTCAGGCGCTGGGTACGCAAAGCTCGCCACCGAACCAGGTCATCATCGGCCTGTCCCTGTTCCTGACCCTGTT
CGTCATGAGCCCGGTACTCGACAAGATTTATGTCGATGCCTACCAGCCTTTTTCGCAAAACAAGATACAGATGCAGGAAG
CGCTGGACAAGGCAGTCGCGCCATTGAAGACCTTCATGATCAAGCAAACGCGTGAATCCGACCTGGCACTCTACGTCAAG
CTGTCGAAGGGACCGGAATTACAAGGACCGGAAGACATCCCCTTGCGTATATTGGTACCTGCATTTGTCACCAGTGAATT
GAAAACCGCATTCCAGATCAGTTTTGCGATCTTCATCCCCTTCCTGATCATCGATATGGTGGTCGCCAGTGTGTTGATGT
CCATGGGTATGATGATGGTGTCGCCGGCCATTGTGGCGCTGCCCTTCAAGCTGATGCTCTTCGTTCTGGTCGATGGCTGG
CAATTGCTGATCGGCTCACTTGCGCAAAGTTTCTACTGA

Protein sequence :
MANNISPLLRRALPLLLLALPVAAMAQQAGLPAFTSSPAPGGGQTYSLSLQTLLLLTGLSFLPAVLLMMTSFTRIIIVLS
LLRQALGTQSSPPNQVIIGLSLFLTLFVMSPVLDKIYVDAYQPFSQNKIQMQEALDKAVAPLKTFMIKQTRESDLALYVK
LSKGPELQGPEDIPLRILVPAFVTSELKTAFQISFAIFIPFLIIDMVVASVLMSMGMMMVSPAIVALPFKLMLFVLVDGW
QLLIGSLAQSFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 7e-22 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 7e-22 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 5e-22 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 3e-25 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 3e-25 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-67 78
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-63 72
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG1259 Protein 9e-54 69
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG2016 Protein 7e-46 55
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG0519 Protein 3e-22 41
fliP YP_001353121.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-23 41