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Name : clpB (mma_1318) Accession : YP_001353008.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1487982 - 1490561 bp Length : 2580 bp Strand : + Note : - DNA sequence : ATGCGTCTCGATAAACTAACCACCAAGCTGCAGGAAGCGCTCGCTGATGCGCAAAGCCATGCAGTAGGCAACGATAATCA ATATATAGAACCGGTACACGTGCTGGTCGCCCTGTTAAGCCAGGACGACAGCAGCACGCGCTCGCTGTTGCAACGTGCCG GTGCCAACATCAATGGCATGACCACTGCGCTACGCAGTGCACTCGATCGCCTGCCCAAGGTCTCCGGCACCGGCGGTGAA GTGCAGATCGGGCGTGACCTCAGTTCGCTGTTGAACCTGGCGGACAAAGAATCACAAATGCATGGCGACCAGTTCATCGC CACTGAAATGGTCTTGCTGGCGCTGACTGAAGATAAGTCAGAGGCAGGCAAGATTGCACGTGAAAACGGCTTGACGCGCA AGGCGCTGGAAGCCGCGATCAAGGCTGTGCGCGGCAGTTCAAAAGTGGATTCGGCGGATGGCGAAGGCCAGCGCGAAGCC CTGAAAAAATACACGCTGGACCTGACCGAGCGCGCCCGTATCGGCAAGCTGGATCCGGTTATCGGTCGTGACGATGAAAT CCGTCGCGCGATTCAGGTATTGCAACGTCGCTCGAAAAACAATCCGGTCTTGATCGGTGAGCCTGGCGTCGGTAAAACCG CCATCGTCGAAGGCCTGGCGCAACGTATCGTCAACGGCGAAGTACCGGACAGCCTGAAAGGCAAACGCGTGCTATCGCTG GATATGGCTTCACTGTTGGCCGGCGCCAAGTATCGCGGCGAATTCGAAGAACGCCTGAAAGCGGTACTCACCGAACTGGC CGAGGATGAAGGGCAGACCATCGTCTTCATCGATGAAATGCATACGCTGGTAGGTGCAGGCAAGGCTGAAGGCGCGATGG ATGCAGGCAATATGCTCAAGCCGGCATTGGCACGTGGTGAGCTGCACTGCGTCGGCGCCACCACGCTGGATGAGTACCGC AAATACATCGAAAAGGATGCAGCACTGGAACGTCGCTTCCAGAAAATCATCGTGGCTGAACCGACGGTGGAAGCAACCAT TGCCATCCTGCGCGGTTTGCAGGAAAAGTATGAGCTGCATCATGGCGTTGATATTACTGATCCGGCTATCGTCGCAGCGG CTGAATTGTCGCATCGCTACATTACTGACCGCTTCTTGCCGGACAAGGCGATCGACCTGATCGATGAGGCTGCATCCAAG ATCAAGATAGAACTCGATTCCAAGCCGGAAGTAATGGACAAGCTGGACCGTCGCGTCATCCAGCTGAAGATTGAGCGTGA AGCCATCAAGAAAGAAAAAGATGAAGCTTCGCAAAAACGCCTGGCCCTGATCGAGGAAGAGATAGAACGCCTGGGTCGAG AGTATGCGGATCTGGAAGAAATCTGGAAAGCCGAGAAATCATCGGCGCAGGGCAGCCAGCACATCAAGGAAGAAATTGAA AAAGTGCGTCTGCAAATGGAAGAGGCAACGCGCAAGAGTGACTGGCAGCGTGTCTCTGAATTGCAGTACAGCACCTTGCC GCAACTGGAAGCACAACTGAAAAATGCGGTGAAGGGCGAAGTGTCGGCAGGCAAACCGCAATTGGTGCGGACCCAGGTTG GCGCTGAAGAAATTGCCGAGGTCGTATCACGTGCCACCGGTATTCCGGTTTCACGCATGATGACCGGCGAGCGCGAGAAA TTATTGCAGATGGAAGATGCGCTGCATAAGCGCGTGGTTGGCCAGCATGAAGCGATTGTCGCGGTGTCGGATGCGATCCG TCGCTCGCGTGCCGGCCTGGGTGACCCTGATCGGCCATATGGTTCCTTCATGTTCCTCGGACCTACCGGTGTCGGTAAGA CCGAGCTGTGCAAGGCGCTGGCTTCCTTCATGTTCGATACCGAGGATTCGCTGATTCGCATCGATATGAGTGAATTCATG GAGAAGCATTCGGTTGCCCGCCTGATCGGTGCACCACCTGGTTATGTCGGCTACGAAGAGGGCGGTTACCTGACCGAAGC GGTACGGCGCAAACCGTACTGCGTGATCCTGCTGGATGAAATCGAAAAGGCGCATCCGGATGTGTTCAACGTCTTGCTGC AAGTACTCGACGATGGGCGTATGACGGATGGGCAGGGACGTACGGTGGACTTCAAGAATACTGTGATCGTCATGACTTCC AACCTTGGTTCTCACAAGATCCAGTCAATGGAAGGCAATGAACCGGCACTGATCAAGATGGCGGTAATGGCTGAAGTGCA AGGTCACTTCCGGCCGGAATTCATCAACCGTATTGATGAAATCGTCGCGTTCCATGCGCTGGATGAAAAGAACATCGGTT CGATCGCGAAGATCCAGCTGCAGGTTCTGGAAAAACGCCTGGCGCGTATGGATATGTCCATGGACGTTTCGGAAGATGCA CTGCAAAAAATCGCAGAAGCCGGTTTCGATCCTGTGTATGGTGCGCGTCCGTTGAAACGTGCTATCCAGCATCAGATAGA AAATCCTTTATCCAAGGCTATCCTGGAAGGGAAGTTTGGACCGAAGGATGTGATCTCGCTCGACGTGCAAGACGGCGAGC TGGTGTTCACCAAGAAGTAA Protein sequence : MRLDKLTTKLQEALADAQSHAVGNDNQYIEPVHVLVALLSQDDSSTRSLLQRAGANINGMTTALRSALDRLPKVSGTGGE VQIGRDLSSLLNLADKESQMHGDQFIATEMVLLALTEDKSEAGKIARENGLTRKALEAAIKAVRGSSKVDSADGEGQREA LKKYTLDLTERARIGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSL DMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKIIVAEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASK IKIELDSKPEVMDKLDRRVIQLKIEREAIKKEKDEASQKRLALIEEEIERLGREYADLEEIWKAEKSSAQGSQHIKEEIE KVRLQMEEATRKSDWQRVSELQYSTLPQLEAQLKNAVKGEVSAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMTGEREK LLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTELCKALASFMFDTEDSLIRIDMSEFM EKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTS NLGSHKIQSMEGNEPALIKMAVMAEVQGHFRPEFINRIDEIVAFHALDEKNIGSIAKIQLQVLEKRLARMDMSMDVSEDA LQKIAEAGFDPVYGARPLKRAIQHQIENPLSKAILEGKFGPKDVISLDVQDGELVFTKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-107 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001353008.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG0079 | Protein | 1e-160 | 47 |
| clpB | YP_001353008.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 9e-110 | 41 |
