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Name : serS (mma_1157) Accession : YP_001352847.1 Strain : Janthinobacterium sp. Marseille Genome accession: NC_009659 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1309188 - 1310483 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAGACATTCAACTTCTTCGTAAAGACATCGATAGCGTTGCAGCCCGCCTGGCCGGTCGCAAGTTCAAGCTCGACGT CGCCGCCTTCAATGCACTCGAAGCGGAGCGCAAGCAGATCCAGTCCAGTACCGAAGATTTGCAAAACAAGCGCAATACCC TGTCCAAGCAAATTGGCGCCTTGAAAGGCAAGGGTGAAGACACTTCCGCAGTCATGGCAGAAGTGGCCGGTATCGGCGAT GAATTGAAAGCATCGGCAGCACGCCTGGATATCGTGCAGGCGAAAATCAGCGAATTCATGCTGTCTATCCCCAACCTGCC GCATGAATCGGTACCTGTCGGTACAGACGAAGCAGGCAATGTGGAATTGCGCAAAGTCGGTACGCCACGCAGCTTTGATT TTGAAATCCGCGATCACGTCGATGTCGGCGCTGCACTGGGCCTGGATTTCGATGTGGCAGCCAAGATTACCGGTTCGCGC TTCTCGGTGATGAAGGGTGGCATTGCCCGCCTGCACCGCGCCCTGGCGCAATTCATGCTGGATACGCATACCGCGGAGCA TGGATACACCGAGTGCTACACACCTTACATCGTGAATGCAGATTCACTGCAGGGTACCGGCCAGTTGCCGAAGTTCGAAG CCGACCTGTTTGCGGTTAAAAAAGGCGGCCAGGAAGGTGAGGGCGAAGCCCTGTACCTGATTCCTACGGCGGAAGTACCG CTGACGAATATCGTGCGCGATGAAATCGTCGCCGGTGATGCACTGCCTATCCGCATGACCGCCCATTCGCCATGCTTCCG TTCGGAAGCCGGCAGCTATGGCCGTGATACGCGCGGCATGATACGCCAGCATCAATTCGACAAAGTCGAAATGGTACAGG TGGTGCATCCTGAAAAATCCTATGAAGCGCTGGATGAGATGTGCGGCCACGCCGAAAACATCCTGAAGAAGCTGGGTCTG CCTTACCGCGTGATCACGCTGTGTACCGGTGATATGGGTTTTGGCGCGACCAAGACTTACGATCTGGAAGTATGGTTGCC GGCACAAAATACCTATCGCGAGATTTCTTCGGTATCGAATTGCGAAGCTTTCCAGGCACGTCGCATGCAGGCGCGTTTCC GTAATGCGCAAGGCAAACCGGAATCGGTACATACGCTGAATGGCTCAGGCCTGGCGGTGGGTCGTACCCTGGTCGCCGTG CTGGAAAACTATCAGCAAGCAGATGGCAGCGTCACGATCCCGGAAGTATTGCATCCATACATGGGCGGCTTGCAGCGTCT GACGCCACAAGCCTGA Protein sequence : MIDIQLLRKDIDSVAARLAGRKFKLDVAAFNALEAERKQIQSSTEDLQNKRNTLSKQIGALKGKGEDTSAVMAEVAGIGD ELKASAARLDIVQAKISEFMLSIPNLPHESVPVGTDEAGNVELRKVGTPRSFDFEIRDHVDVGAALGLDFDVAAKITGSR FSVMKGGIARLHRALAQFMLDTHTAEHGYTECYTPYIVNADSLQGTGQLPKFEADLFAVKKGGQEGEGEALYLIPTAEVP LTNIVRDEIVAGDALPIRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALDEMCGHAENILKKLGL PYRVITLCTGDMGFGATKTYDLEVWLPAQNTYREISSVSNCEAFQARRMQARFRNAQGKPESVHTLNGSGLAVGRTLVAV LENYQQADGSVTIPEVLHPYMGGLQRLTPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-98 | 56 |
