Gene Information

Name : hpcD (PSPA7_0967)
Accession : YP_001346353.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : -
Position : 967668 - 968060 bp
Length : 393 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF02962

DNA sequence :
ATGCCGCACTTCATCGCCGAATACACCGACAACATCGAAGCCGAGGCCGACCTGCCCGGCCTGTTCGAGAAGGTCCACGC
CTGCCTCGGCGCCAGCGGCGTGTTCCCGCTCGGCGGCATCCGCAGCCGCGGCGTACGCCTGGACACCTGGCGCATGGCCG
ACGGCAGGCACGACTACGCCTTCGTCCACATGACCCTGAAAGTCGGCGCCGGTCGCGACCTGGAGACTCGCCGGCAAGTC
GCCGAGGCACTTTTCGAGGTGATCACCGCGCACTTCGCCGAGCTCCAGGCGCGACGCCTGCTGGCGCTGTCCTTCGAACT
CAGCGAACTGGACGCGGAGCTGAACTACAAGCGCAACAACGTGCATGAATTCCTGAACAACCCGGCGGGCTGA

Protein sequence :
MPHFIAEYTDNIEAEADLPGLFEKVHACLGASGVFPLGGIRSRGVRLDTWRMADGRHDYAFVHMTLKVGAGRDLETRRQV
AEALFEVITAHFAELQARRLLALSFELSELDAELNYKRNNVHEFLNNPAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 2e-38 63