Gene Information

Name : hpaR (PSPA7_0956)
Accession : YP_001346342.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator HpaR
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 956595 - 957017 bp
Length : 423 bp
Strand : +
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF01047; match to protein family HMM TIGR02337

DNA sequence :
ATGTCGACGCCAAGACCCTCCCTGACCCTGACCCTGTTGCAGGCTCGCGAAGCCGCGATGAGTTTCTTCCGCCCCTCCCT
CAACCAGCATGGCCTTACCGAGCAGCAGTGGCGGGTGATCCGCATCCTGCGCCAGCAAGGCGAGATGGAGAGCTACCAGC
TGGCCAACCAGGCCTGCATCCTGCGCCCGAGCATGACCGGCGTGCTGGCGCGCCTGGAGCGCGACGGCATCGTGCGGCGC
TGGAAGGCGCCCAAGGACCAGCGGCGGGTCTACGTGAACCTGACCGAGAAGGGCCAGCAGTGCTTCGTCTCGATGAGCGG
TGACATGGAGAAGAACTACCAGCGCATCCAGGAGCGCTTCGGCGAGGACAAGCTCGCGCAGCTACTCGATCTGCTCAACG
AGCTGAAGAAGATCAAGCCCTGA

Protein sequence :
MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRR
WKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEDKLAQLLDLLNELKKIKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 1e-30 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaR YP_001346342.1 homoprotocatechuate degradation operon regulator HpaR BAC0505 Protein 2e-26 50