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Name : choV (PSPA7_6161) Accession : YP_001351472.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Unknown Product : choline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 6367276 - 6368454 bp Length : 1179 bp Strand : - Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; match to protein family HMM TIGR03415 DNA sequence : ATGACCGCGATCCGATTCGACCACGTGGACGTCATCTTCGGCACCCACACCAAGGAAGCCCTGAAGCTCCTCGACCAGGG CCTCGGCCGCGCCGAGATCCTCAAGCGCACCGGCCAGGTGCTCGGCGTCGAGGACGCCTGCCTGGACGTCAACCGCGGCG AGATCTGCGTGCTGATGGGGCTTTCCGGCTCCGGCAAGTCGAGCCTGCTGCGCTGCATCAACGGCCTGAACAAGGTCAGC CGCGGCAAGCTGCTGATCGAGCACGAAGGTTCGCAGGTGGACATCGCCAACTGCTCGCCGGCGACCCTCAAGGCGATGCG CACCAAGCGCATCGCCATGGTGTTCCAGAAGTTCGCCCTGATGCCCTGGCTGACGGTGGCCGAGAACGTCGGTTTCGGCC TGGAGATGCAGGGCCGCCCGGCCGCCGAGCGGAAGAAACTGATCGACGAGAAGCTCGAGCTGGTCGGCCTCTCGCAGTGG CGCGACAAGCGTCCCGACTCGCTCTCCGGCGGCATGCAGCAGCGCGTCGGCCTGGCCCGCGCGCTGGCGATGGACGGCGA CATCCTGCTGATGGATGAACCCTTCTCCGCCCTCGACCCGCTGATCCGCCAGCAATTGCAGGATGAACTGCTGGTGCTGC AACGGCAACTGCACAAGACCATCGTGTTCGTCAGCCACGACCTCGACGAGGCGCTGAAGATCGGCACCCGCATCGCGATC ATGAAGGACGGCCGGATCATCCAGCACGGCAGGCCGGAAGAGATCGTGCTGAGCCCGGCGGACGACTACGTGCGTACCTT CGTCGCCCATACCAACCCGCTCAACGTGCTGTGCGGGCAGAGCCTGATGCGTGGCCTCGACCAGTGCATCCGGCAGAACG ACGAGATCTGCTTCGACCAGGGCCGCGACTGCTGGATCGGCCTGAGCGAAGGCGACGTGCTCAAGGGCGCGCGCCAGGGC GGCAACGTCATCGACCTGCAACGCTGGCGCCAGGGCGACCCGGTGGAGAAGCTGCGCCGCGAACCGACCCTGGTGGATGT CAGCATCCGCATGCGCGATGCCTTGCAGATCCGCTACCAGACCGGCCACAAGCTGGTCCTGCAGGAGCAGGACAGGGTGG TCGGGGTGCTCGGCGACAGCGAGCTGTATCACGCACTGCTGGGCAAGAACCTCGGCTGA Protein sequence : MTAIRFDHVDVIFGTHTKEALKLLDQGLGRAEILKRTGQVLGVEDACLDVNRGEICVLMGLSGSGKSSLLRCINGLNKVS RGKLLIEHEGSQVDIANCSPATLKAMRTKRIAMVFQKFALMPWLTVAENVGFGLEMQGRPAAERKKLIDEKLELVGLSQW RDKRPDSLSGGMQQRVGLARALAMDGDILLMDEPFSALDPLIRQQLQDELLVLQRQLHKTIVFVSHDLDEALKIGTRIAI MKDGRIIQHGRPEEIVLSPADDYVRTFVAHTNPLNVLCGQSLMRGLDQCIRQNDEICFDQGRDCWIGLSEGDVLKGARQG GNVIDLQRWRQGDPVEKLRREPTLVDVSIRMRDALQIRYQTGHKLVLQEQDRVVGVLGDSELYHALLGKNLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 6e-58 | 43 |
