|
Name : betB (PSPA7_6158) Accession : YP_001351469.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 6363057 - 6364529 bp Length : 1473 bp Strand : - Note : catalyzes the formation of betaine from betaine aldehyde DNA sequence : ATGGCCCGATTCGAAGAACAGAAGCTCTACATTGGCGGTCGCTACGTGGAGGCCAGCAGTGGCGCCACCTTCGAGACCAT CAACCCGGCCAATGGCGAAGTGCTCGCCAAGGTCCAGCGGGCTTCCAGGGAAGACGTCGAGCGGGCCGTGCAGAGCGCCG TCGAAGGGCAGAAGGTCTGGGCGGCGATGACCGCCATGCAACGCTCGCGCATCCTCCGTCGCGCCGTCGACCTCCTCCGC GAGCGCAACGACGAACTGGCCGCCCTGGAAACCCTGGATACCGGCAAGCCGCTGGCGGAAACCCGCGCGGTGGACATCGT CACCGGCGCCGACGTGCTCGAGTACTACGCGGGCCTGGTCCCGGCCATCGAAGGCGAGCAGATTCCGCTGCGCGAAACCA GTTTCGTCTACACCCGCCGCGAGCCGCTGGGTGTGGTCGCCGGCATCGGCGCCTGGAACTACCCGGTGCAGATCGCCCTG TGGAAATCAGCCCCGGCCCTCGCTGCCGGCAACGCGATGATCTTCAAGCCCAGCGAGGTCACCCCGCTGACCGCCCTCAA GCTGGCCGAGATCTACACCGAGGCCGGCGTGCCGGACGGCGTGTTCAACGTGCTCACCGGCAGCGGACGCGAAGTCGGCC AGTGGCTGACCGAGCACCCGCTGATCGAGAAGATCTCCTTCACCGGCGGCACCTCCACCGGCAAGAAGGTCATGGCCAGC GCCTCCAGCTCGTCGCTGAAGGAAGTGACCATGGAACTGGGCGGAAAGTCCCCGCTGATCATCTTCCCCGACGCCGACCT CGACCGCGCCGCCGACATCGCCGTCATGGCCAACTTCTTCAGCTCCGGCCAGGTCTGCACCAACGGCACCCGGGTATTCA TCCACCGTTCCCAGCAGGCCCGCTTCGAAGCCAAGGTACTGGAGCGCGTGCAGCGCATCCGTCTTGGCGATCCGCAGGAC GAGAACACCAACTTCGGCCCGCTGGTCAGCTTCCCGCACATGGAAAGCGTGCTCGGCTACATCGAGTCCGGCAAGGCGCA GAAGGCTCGCCTGCTGTGCGGCGGCGAACGGGTGACCGAGGGGGCGTTCGGCAATGGCGCCTACGTCGCGCCGACCGTGT TCACCGATTGCAGCGACGACATGACCATCGTCCGCGAGGAAATCTTCGGACCGGTGATGAGCATTCTGGTCTACGACGAC GAGGACGAGGCGATCCGCCGCGCCAACGACACCGAGTACGGCCTCGCCGCCGGCGTCGTGACCCAGGACCTGGCCCGCGC CCACCGCGCCATCCATCGCCTGGAAGCCGGCATCTGCTGGATCAATACCTGGGGCGAGTCGCCGGCGGAAATGCCGGTCG GCGGTTACAAGCAATCCGGTGTCGGTCGCGAGAACGGCCTGACCACCCTGGCTCACTACACTCGCATCAAGTCCGTGCAA GTGGAGCTGGGCGACTACGCCTCGGTGTTCTGA Protein sequence : MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDLLR ERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTEGAFGNGAYVAPTVFTDCSDDMTIVREEIFGPVMSILVYDD EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ VELGDYASVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 5e-77 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-77 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-77 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-77 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-77 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-75 | 41 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| betB | YP_001351469.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 1e-75 | 41 |
