Gene Information

Name : PSPA7_6034 (PSPA7_6034)
Accession : YP_001351350.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : transposase InsF for insertion sequence IS3A/B/C/D/E/fA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 6228705 - 6229571 bp
Length : 867 bp
Strand : -
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00665

DNA sequence :
GTGAAGTTTCGCGCCATCGAGGCGTTGGCTGGTCGTTACCCCGTAGCACCGATGTGCCGGTTGTTGCAGGTGTCGCGCAG
CGGTTTCTATGCCTGGCAACAGCGACCACCTTCGGTGAGAGAGATGGCGAATCGGCGTCTGAGCAAGGAGATCCGAACCA
TCCACCACGAGGTGAATGGGATCTATGGTCATCGCCGCATCAAGGCTGAACTGACGGCCATGGGGCAGGCGTGCGGGCGG
CATCGGGTTGCTCGATTGATGCGCGAAGCCGGCCTGCGTGTTCGTTCACGCAAGCGCTGGCGGCTGGTTTCCAGTAGCCG
CCACGATCTACCGATTGCGCCGAATCACCTGGATCGCCAGTTCGTCTCGGATCGAGCCAACCGGCACTGGGTCTCGGACA
TGACCTACGTGCGGACTGCGCAAGGCTGGCTGTATCTGGCCGTTGTGCTCGATCTCTATTCACGCGCCGTGGTCGGTTGG
GCGATGCACCACCGCATGCAGCAAGCCCTGGTGCACGCCGCGCTGGAGATGGCCGTGGCACGCCGACAGCCACAGGCGGA
GGTCCTGCTGCACTCGGATCGCGGCAGCCAATACTGCGCGTACGACTACCAAGCCTTGCTTCGGCGACATCGCATCGTGC
CCAGCCATTCGCGACCAGGGAACTGCTGGGATAACGCGGCTATGGAGAGCTTTTTCCGTTCGCTGAAGGCCGAGCGGGTG
TACCTGACGCGCTATGCCAGCTACCAGGAGGCGAAAACCGACCTGTTCGACTACATCCGCTTTTACAATCACCGTCGTCG
CCACTCGACGCTGGGCTATCTCAGCCCGATGGAGTTTGAGCGGCGCTATGCGAGCAGTAACTCTTAA

Protein sequence :
MKFRAIEALAGRYPVAPMCRLLQVSRSGFYAWQQRPPSVREMANRRLSKEIRTIHHEVNGIYGHRRIKAELTAMGQACGR
HRVARLMREAGLRVRSRKRWRLVSSSRHDLPIAPNHLDRQFVSDRANRHWVSDMTYVRTAQGWLYLAVVLDLYSRAVVGW
AMHHRMQQALVHAALEMAVARRQPQAEVLLHSDRGSQYCAYDYQALLRRHRIVPSHSRPGNCWDNAAMESFFRSLKAERV
YLTRYASYQEAKTDLFDYIRFYNHRRRHSTLGYLSPMEFERRYASSNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-52 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-52 46
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-53 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-53 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-53 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-52 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-52 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-52 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-53 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-52 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-52 45
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 3e-34 45
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 3e-34 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 6e-52 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-40 44
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-40 44
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 1e-34 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-35 43
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-35 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 7e-47 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-46 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-46 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-37 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-34 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-34 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 4e-34 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-34 42
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 9e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_6034 YP_001351350.1 transposase InsF for insertion sequence IS3A/B/C/D/E/fA VFG1706 Protein 6e-53 45
PSPA7_6034 YP_001351350.1 transposase InsF for insertion sequence IS3A/B/C/D/E/fA VFG1484 Protein 2e-34 45
PSPA7_6034 YP_001351350.1 transposase InsF for insertion sequence IS3A/B/C/D/E/fA VFG0785 Protein 7e-35 42
PSPA7_6034 YP_001351350.1 transposase InsF for insertion sequence IS3A/B/C/D/E/fA VFG1631 Protein 5e-48 41