Gene Information

Name : algR (PSPA7_6007)
Accession : YP_001351323.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 6204660 - 6205406 bp
Length : 747 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00072; match to protein family HMM PF04397

DNA sequence :
ATGAATGTCCTGATTGTCGATGACGAACCTCTGGCGCGAGAGCGCCTGGCCCGATTGGTAGGGCAACTGGACGGCTATCG
CGTCCTCGAGCCCTCGGCCAGCAATGGCGAAGAAGCGCTGACGCTGATCGACAGCCTCAAGCCCGATATCGTCCTGCTGG
ATATCCGCATGCCCGGTCTGGACGGCCTCCAGGTCGCGGCCAGACTCTGCGAGCGGGAAGCCCCGCCCGCGGTGATCTTC
TGCACGGCCCATGACGAATTCGCCCTGGAAGCCTTCCAGGTCAGCGCCGTGGGCTATCTGGTCAAGCCGGTGCGCAGCGA
GGACCTGGCCGAAGCGCTGAAGAAGGCCTCGCGGCCGAACCGCGTGCAGCTGGCCGCGCTGACCAAGCCTCCGGCCGCCG
GTGGCAGCGGACCGCGCAGCCACATCAGCGCGCGGACCCGCAAGGGGATCGAACTGATCCCCCTGGAGGACGTGATCTTC
TTCATTGCCGACCACAAGTACGTGACCCTGCGCCATGCGCAGGGCGAAGTGCTGCTGGACGAGCCGTTGAAGGCTCTGGA
GGACGAGTTCGGCGAACGCTTCGTGCGTATCCACCGCAACGCCCTGGTCGCCCGCGAACGGATCGAACGCCTACAGCGTA
CGCCGCTGGGGCATTTCCAGCTCTATCTGAAAGGACTCGATGGCGATGCGCTGACCGTCAGCCGACGGCACGTGGCCGGC
GTCAGGCGCCTGATGCACCAGCTCTGA

Protein sequence :
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPAAGGSGPRSHISARTRKGIELIPLEDVIF
FIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAG
VRRLMHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-52 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_001351323.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 2e-114 99