Gene Information

Name : PSPA7_5381 (PSPA7_5381)
Accession : YP_001350711.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : putative TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 5545231 - 5547525 bp
Length : 2295 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783

DNA sequence :
TTGATAATAATTATCAATTTGTTTAGCTTTGCCGTCGACAAAACAACAGCAAATCGGACACCCCTCATGCCCCGCTCCAT
TCCTTCGCGCCCGGCTCCCCTGGCGCTTTCCCTCTCCCTGTTCGCTTCGTTTTCCGCTCCCACGCTGGCCGCCGATCCGG
TGGAGCAGCAGATGGTGGTGATCGGTTCGCGCGCGCCGACCAGCATCAGCGAGTTACCCGGCACGGTCTGGGTGATCGAG
CGCGAGCAACTGGACCAGCAGACCCAGGCCGGCGTGCCGCTGAAAGAGGCGCTGGGGCAATTGATCCCGGGCCTGGACAT
CGGCTCGCAGGGCCGCACCAACAACGGCCAGAACCTGCGCGGGCGCAGCGTGCTGGTAATGATCGACGGCGTGTCGCTGA
ACAGTTCGCGTGGCATCAGCCGGCAGTTCGACTCCATCGATCCGTTCAACATCGAGCGCATCGAGGTGATGTCCGGCGCC
AGCGCGGTCTATGGCGGCGGCGCCACCGGCGGAATCATCAATATCGTGACCAGGAAGGGCGTCGGCGGCGACACCCGCTT
CAACACCGAACTGGGCGCCCGCAGCGGCTTCCAGAGCCACGAGGACCACGACCTGCGCGCGGCGCAGTCGATCAGCGGCG
GCAATGATCTGTTCAACGGCCGCCTGGCCATCGCCTACCAGAAGAACGGCGCGGCCTACGACGGCAATGGCGACCAGGTG
CTGACCGACATCACCCAGACCGACCTGCAATACAACAGGTCGGTGGATCTGATGGGCAGCCTCGGCTTCACTTTCGCCAA
TGGCCACAGCCTCGATCTCGGCCTGCAGTACTACGACTCCGGCTACGATGGCGACCGCGGCCTCGATCTCGGGCGCAACT
TCGACGCCCTGCGCGGACGGGCGCCCTATTCGATCAAGGGCGGCGTCGACCTCGACCGCGAGCCGGAGAGCAAGCGCCAC
CAGTTCAACGCCACCTACCACGCGCCGGAAGTGCTGGGCCACGACCTCTACCTGCAGGCCTACTACCGCAACGAGAAGAT
GGCCTTCAACCCCTTCCCCACCATCCGTTACAACAATAGCGGCGCGATCAACTACGGCACCTCCTACTACTCGGCCTCGC
AGCAGGACACCGACTACTATGGGATGAAACTGGCCCTGGTGAAGACCTGGGAGCGTGTCAGCCTGACCTACGGGGTGGAC
CTGGACCGGGAGAAGTTCACCTCCGACCAGATGCTCTTCAACCTGCCGCTCGCCGCCGCCAGCGGCGGGCTGGTCGCCAG
CGAGCAGGCCAAGCTGGGCCGCTACCCGGACATCGATACCGACAGCCGCGCGTTCTTCCTCCAGGGCAGTTGGAAGGCCA
CCGACGACCTGACCCTGAGCGCCGGCGTGCGGCGCCAGTCGATGAGCACCGACGTCAGCGACTTCGTCGCGGCGAACCAG
CAGATCCTCATCGCCAACGGCCTCGGCAAGACCGCCGACGCGGTTCCGGGCGGGAGCAAGGACTACGACGTCAACCTGGT
CAACGTCGGCGCCATCTACAAGCTGAACCAGCAACAACAGGTCTGGGCCAACTACAGCGAAGGCTTCGAGCTGCCGGACC
CGGCCAAGTACTACGGCTTCGGGCGCTACGGCGCAGCCGACGGCAACGGCCACTACCCGCTGCTGCAGGGCGTGAGCGTG
AACGATTCGCCGCTGGACGGGATCAAGACCAAGCAGGTCGAGCTGGGCTGGCGGCACACCGACGGTGCGCTGGATACCCA
GGTGGCGGCGTTCTATTCCTGGTCGGACAAGAGCATCAAGTACGACTCGAAGACCCTGGCGGTGCTGCAGCAGGACACCA
AGAAGCGCAACTATGGCTTCGAGGGCCAGGCCACCTACTGGCTGGACGATCACTGGCAGGTCGGCGTCAACGGCCTGGCC
ATCCGCTCCCAGGAGAAAGTCGATGGCCGCTGGCTGAAGCAGGACGTGACCTCGGCCAGCCCGTCCAAGGCCGGCGCCTT
CGTCGGCTGGAAGGACGACCAGCGCAGCCTGCGCCTGCAGGGCGTGCGCACCTTCAACCTGAACGACGAGGCGGGCAACA
AGATCGACGGCTACGCGCTGTTCGACCTGCTCGGCACCCAGGCGCTGCCGGTGGGCAGCCTCACCGCGGGTATCCAGAAC
CTGCTGGACAAGGACTACACCACGGTCTGGGGACAGCGCGCCCAGGTCTACTACGGCGGACTCGCGCCAGCGGGGCTGTT
CGATTACAAGGGGCGGGGACGCACCTACAGCCTGACGTATAGCGTGGAGTTCTGA

Protein sequence :
MIIIINLFSFAVDKTTANRTPLMPRSIPSRPAPLALSLSLFASFSAPTLAADPVEQQMVVIGSRAPTSISELPGTVWVIE
REQLDQQTQAGVPLKEALGQLIPGLDIGSQGRTNNGQNLRGRSVLVMIDGVSLNSSRGISRQFDSIDPFNIERIEVMSGA
SAVYGGGATGGIINIVTRKGVGGDTRFNTELGARSGFQSHEDHDLRAAQSISGGNDLFNGRLAIAYQKNGAAYDGNGDQV
LTDITQTDLQYNRSVDLMGSLGFTFANGHSLDLGLQYYDSGYDGDRGLDLGRNFDALRGRAPYSIKGGVDLDREPESKRH
QFNATYHAPEVLGHDLYLQAYYRNEKMAFNPFPTIRYNNSGAINYGTSYYSASQQDTDYYGMKLALVKTWERVSLTYGVD
LDREKFTSDQMLFNLPLAAASGGLVASEQAKLGRYPDIDTDSRAFFLQGSWKATDDLTLSAGVRRQSMSTDVSDFVAANQ
QILIANGLGKTADAVPGGSKDYDVNLVNVGAIYKLNQQQQVWANYSEGFELPDPAKYYGFGRYGAADGNGHYPLLQGVSV
NDSPLDGIKTKQVELGWRHTDGALDTQVAAFYSWSDKSIKYDSKTLAVLQQDTKKRNYGFEGQATYWLDDHWQVGVNGLA
IRSQEKVDGRWLKQDVTSASPSKAGAFVGWKDDQRSLRLQGVRTFNLNDEAGNKIDGYALFDLLGTQALPVGSLTAGIQN
LLDKDYTTVWGQRAQVYYGGLAPAGLFDYKGRGRTYSLTYSVEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 6e-145 49
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 6e-145 49
iutA AAK71635.1 IutA Virulence SHI-3 Protein 8e-145 49
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 5e-145 49
iutA AAD44750.1 IutA Virulence SHI-2 Protein 2e-143 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_5381 YP_001350711.1 putative TonB-dependent receptor VFG0619 Protein 3e-145 49
PSPA7_5381 YP_001350711.1 putative TonB-dependent receptor VFG1085 Protein 5e-145 49
PSPA7_5381 YP_001350711.1 putative TonB-dependent receptor VFG0936 Protein 2e-145 49