|
Name : PSPA7_5342 (PSPA7_5342) Accession : YP_001350673.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Unknown Product : integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 5509888 - 5510901 bp Length : 1014 bp Strand : + Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02249 DNA sequence : ATGAAAACCAGCACTGCACCGCTACCACCGCTGCGTTCGGTCAAGGTTCTGGACCAGTTGCGTGAGCGCATACGCTACTT GCATTACAGTTTACGAACCGAACAAGCGTATGTCCACTGGGTTCGTGCCTTCATCCGTTTCCACGGTGTGCGTCACCCAG CAACCTTGGGCAGCAGCGAAGTCGAGGCATTCCTGTCTTGGCTGGCGAACGAGCGTAAGGTTTCGGCATCCACACATCGG CAGGCATTGGCGGCCTTGCTGTTCTTCTACGGCAAGGTGCTGTGCGCGGATCTGCCTTGGCTTCAGGAGATCGGAAGACC TCGGCCGTCGCGGCGCTTGCCGGTCGTGCTGACCCCGGATGAGGTGGTTCGCATCCTCGGTTTTCTGGAAGGGGAGCATC GTTTGTTCGCCCAGCTTCTGTATGGAACGGGCATGCGGATCAGCGAGGGTTTGCAACTGCGGGTCAAGGATCTGGATTTC GATCACGGCACGATCATCGTGCGGGAGGGCAAGGGCTCCAAGGATCGGGCATTGATGTTGCCCGAGAGCTTGGCGCTCGG CCTGCGCGAGCAGCTGGCGCGTGCCCGGGCATGGTGGCTGAAGGACCAGGCCGAGGGCCGCAGCGGCGTTGCGCTTCCCG ACGCCCTTGAGCGGAAGTATCCGCGCGCCGGGCATTCCTGGCCGTGGTTCTGGGTTTTTGCGCAGCACACGCATTCGACC GATCCACGGAGCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACA AGCAGGCATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACA TTCGAACCGTGCAGGATCTGCTCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGT GCCGGAGTGCGCTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAG Protein sequence : MKTSTAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSASTHR QALAALLFFYGKVLCADLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF DHGTIIVREGKGSKDRALMLPESLALGLREQLARARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHST DPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGG AGVRSPLDALPPLTSER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 1e-148 | 99 |
| intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-148 | 99 |
| EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 1e-148 | 99 |
| intI1 | AFL65913.1 | class 1 integrase | Not tested | SGI1-J6 | Protein | 1e-111 | 99 |
| intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 3e-148 | 98 |
| intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 3e-148 | 98 |
| intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 4e-148 | 98 |
| intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 3e-148 | 98 |
| intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 4e-148 | 98 |
| intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 3e-148 | 98 |
| intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 4e-148 | 98 |
| intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 3e-148 | 98 |
| intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 4e-148 | 98 |
| intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-148 | 98 |
| intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-148 | 98 |
| intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 3e-148 | 98 |
| intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 4e-148 | 98 |
| unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 2e-147 | 98 |
| intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 3e-148 | 98 |
| intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-148 | 98 |
| intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 4e-148 | 98 |
| int1 | YP_005160012.1 | integrase | Not tested | Not named | Protein | 8e-120 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPA7_5342 | YP_001350673.1 | integrase/recombinase | VFG1028 | Protein | 1e-147 | 98 |
