Gene Information

Name : PSPA7_5307 (PSPA7_5307)
Accession : YP_001350639.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 5466495 - 5467451 bp
Length : 957 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by Glimmer2; putative

DNA sequence :
ATGCACGAATCTCACCTTTCCCTGACACCCCGGCTCGGCATCAGCGCCTGCCTGCTCGGCGAGCCGGTGCGCTTCAACGG
TGGACACAAGCGTTCCGCGCTTTGCGAGGAACTGGCGCGGCACGTCGAGTTCATCTCCTTCTGCCCGGAACAGGCCATCG
GCCTGGCCACGCCGCGTCCGGCGATTCGCCTGGAAGGCACTCCGGAAGCCGCCGAGGCGCGGAGCCGCGACGGCCTGGCG
GTCGGCGGAGCGCTCGCCGAATACGCGCGGCGGGTGACGCAACGGACGGACACGCTGGACGGCTTCATCTTCATGCAGCG
TTCGCCATCCTGCGGACTGCAGCGGGTCAAGGTCTACCCGGAAGGAGGCGGCGCGCCGCGCGCCGAAGGCCGTGGACGCT
TCGCCGCAGCCCTTTGCGAAGCCTTGCCGGAGCTACCGGTGGAAGAAGAAGGCCGGCTGCACGATCCGGTCCTGCGGGAA
AACTTCCTCACCCGGGTGTTCGCCCATGCCCACTGGCAGGCCCTGCGCCAGCGCGGGCTCAGCCATGCGGCCATCGTCGC
CTTCCACAGCCGCTACAAGTACCAGTTGCTGGCGCATTCGCCGGAGCACTACCGCAGCCTTGGCCGCCTGCTCGGCGAGG
CCGGCCACCACCCGCCGGAAGCTCTCGGCAGACGCTACTTCGGCGCGCTGATGCAGGGCCTGCGCCGCTGCGCGACCCGC
GGCAGCCACGGCAACGTGTTGCTGCACCTGAGCGGCTACCTGAAACGCAGCCTCGCCGCCGACGACAGGCGGGAACTGCG
CGAGCTGATCGAGCAGTACCGACACGGCAGCGTGCCGCTGGTGGTACCGCTGACCCTGCTGAAGCACCACTTCCGCCGCC
ACCCGCAGGCGTACATCGCCCAGCAGGCCTACCTGCAACCGCACCCGGCCGAACTCGGCCTGCGCAACTCGCTCTAG

Protein sequence :
MHESHLSLTPRLGISACLLGEPVRFNGGHKRSALCEELARHVEFISFCPEQAIGLATPRPAIRLEGTPEAAEARSRDGLA
VGGALAEYARRVTQRTDTLDGFIFMQRSPSCGLQRVKVYPEGGGAPRAEGRGRFAAALCEALPELPVEEEGRLHDPVLRE
NFLTRVFAHAHWQALRQRGLSHAAIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHHPPEALGRRYFGALMQGLRRCATR
GSHGNVLLHLSGYLKRSLAADDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPQAYIAQQAYLQPHPAELGLRNSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-51 46
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-51 46
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-51 46
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-51 46
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_5307 YP_001350639.1 hypothetical protein VFG0490 Protein 8e-52 46