Gene Information

Name : PSPA7_5234 (PSPA7_5234)
Accession : YP_001350566.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5383679 - 5384392 bp
Length : 714 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00005

DNA sequence : 
ATGCCTACAACAAACAAGCACGAATCATTGATCTCCCTGCGGGGAATCGGCAAGGGCTATCTCCTGGGGGGGCAGCCACT
GCAGATACTGAAAGACGTCTGCCTGGACATCTTTCCCGGTGAAAGTTGCGCGATCGTCGGCGCGTCGGGCTCGGGCAAGA
GCACCCTGCTGAATATCCTCGGCCTGCTCGACCGGCCGGACAGCGGCGCCTATCGATTCGCCGAACACGACATCTTCAGG
GTCGACGAAGACCAGTTGGCGGCGATCCGCAACCGCCTGATCGGTTTCGTCTTCCAGAGTTTCAACCTGCTGCCGCGCCT
GAGCGCGCTGGAGAACGTGGCGCTGCCGCTGGGCTATCGTGGCATGCCGCGCCGCGAGGCGTTGGAGCGCGCCGCGGCGA
TGCTCGCCCAGGTCGGCCTCGCCGAGCGCGCCGGGCATCGCCCGGCGGACCTCTCCGGCGGCCAGCGGCAGCGTGTCGCC
ATCGCCCGCGCGCTGGTCGGCGAGCCCGCGCTGATCCTCGCCGACGAACCGACCGGCAACCTCGACGCGAGCACCGCGAA
GGAAGTGCTGGAACTGCTCCTGGCGCTCAACCGCGAACGCCAGGTGACCCTGGTGGTGGTCACCCACGATCCCGGCCTGG
CCGCCCGTCTCGGGCGCCAGCTGACGGTGCGCCATGGCGAGATCCACGAGGAACTGGCGGAGACTTGCCGGTGA

Protein sequence : 
MPTTNKHESLISLRGIGKGYLLGGQPLQILKDVCLDIFPGESCAIVGASGSGKSTLLNILGLLDRPDSGAYRFAEHDIFR
VDEDQLAAIRNRLIGFVFQSFNLLPRLSALENVALPLGYRGMPRREALERAAAMLAQVGLAERAGHRPADLSGGQRQRVA
IARALVGEPALILADEPTGNLDASTAKEVLELLLALNRERQVTLVVVTHDPGLAARLGRQLTVRHGEIHEELAETCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-43 53
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-48 50
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-35 44
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 5e-24 42
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_5234 YP_001350566.1 ABC transporter ATP-binding protein VFG2059 Protein 2e-14 41