Gene Information

Name : PSPA7_4952 (PSPA7_4952)
Accession : YP_001350288.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5107295 - 5107978 bp
Length : 684 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCGAATACTGGTGGTCGAAGACAACCGCGACATCCTGGCCAACCTGGCCGACTACCTGTCGCTCAAGGGTTACACGGT
GGACTGCGCGCAGGACGGGTTGTCCGGCCTGCACCTGGCGGCCACCGAGCACTACGACCTGATCGTGCTCGACGTGATGC
TGCCGGGCATCGACGGCTATACGCTGTGTCGGCGCCTGCGCGAGGATGCCCGGCGTGACACCCCGGTGATCATGCTCACC
GCCCGGGACCAACTGGACGACCGCCTGCAGGGCTTCCGTTCCGGCGCCGACGATTACCTGGTCAAGCCCTTCGCCCTTTC
CGAACTGTCCGCGCGTATCGAGGCGGTGCTGCGCCGCGCCCAGGGCGGCGGCCGGCGCGAGCTGAGCGTGGCCGATCTCA
GCTATGACCTGGACACCCTGGAGGTCAGGCGTGCCGGCAAGTCGCTCAAGCTCAACCCGATCGGCCTCAAGCTGCTCGCC
GTGCTGATGCAGAAGAGCCCCCACGTGGTCCGCCGGGACGCCCTGGAGGAAGCGGTGTGGGGCGACGACTGTCCGGACAG
CGACAGCCTGCGCAGCCACGTCCATCAACTCCGCCAGGTGATCGACAAGCCATTCCCCGTGGCCTTGCTGCATACGGTGC
ATGGCGTCGGCTACCGCCTGGCGGAGGAGCCGAATGGAGTATAA

Protein sequence : 
MRILVVEDNRDILANLADYLSLKGYTVDCAQDGLSGLHLAATEHYDLIVLDVMLPGIDGYTLCRRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLVKPFALSELSARIEAVLRRAQGGGRRELSVADLSYDLDTLEVRRAGKSLKLNPIGLKLLA
VLMQKSPHVVRRDALEEAVWGDDCPDSDSLRSHVHQLRQVIDKPFPVALLHTVHGVGYRLAEEPNGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-36 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_4952 YP_001350288.1 putative two-component response regulator BAC0125 Protein 8e-37 42
PSPA7_4952 YP_001350288.1 putative two-component response regulator BAC0197 Protein 8e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_4952 YP_001350288.1 putative two-component response regulator VFG0596 Protein 4e-37 42
PSPA7_4952 YP_001350288.1 putative two-component response regulator VFG1390 Protein 4e-35 42