Gene Information

Name : gspG1 (PSPA7_4829)
Accession : YP_001350170.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : HxcT pseudopilin
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4970955 - 4971404 bp
Length : 450 bp
Strand : -
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence :
ATGGATATCGTGCAGTTCAGCTCCAGCCCGAAAGGACGTCGGGGACAACGGGGCTTCACCCTGATCGAGATCATGGTGGT
GGTGGTGATCCTCGGCATCCTCGCCGCGATGGTGGTACCCAAGGTGCTCGACCGGCCCGACCAGGCCCGCGCCACCGCGG
CGCGCCAGGACATTTCCGGACTGATGCAGGCGCTCAAGCTCTACCGCCTCGACCAGGGGCGCTATCCGAGCCAGGCGCAG
GGCCTCAAGGTGCTGGCGGAACGTCCCGCCGATGCCTCGGCGAGCAACTGGCGCTCGTACCTGGAGCGCCTGCCCAACGA
TCCCTGGGGCAAGCCCTACCAGTACCTGAACCCGGGCGTGAACGGCGAGATCGATGTCTTCTCCCTCGGCGCCGACGGCC
AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA

Protein sequence :
MDIVQFSSSPKGRRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQ
GLKVLAERPADASASNWRSYLERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 6e-34 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG1 YP_001350170.1 HxcT pseudopilin VFG1871 Protein 2e-40 59
gspG1 YP_001350170.1 HxcT pseudopilin VFG0180 Protein 4e-37 57
gspG1 YP_001350170.1 HxcT pseudopilin VFG2050 Protein 1e-34 52