Gene Information

Name : PSPA7_4501 (PSPA7_4501)
Accession : YP_001349851.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : TraG/TraD family protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 4629139 - 4631370 bp
Length : 2232 bp
Strand : +
Note : Annotation was generated automatically without manual curation

DNA sequence :
ATGGCTGGCCAGTACCCGCTGGAAGCGCTCTTGCGGCCTGCCGTGGAGCTCTACACCACCACCGTGTGCTTCACCGCGGC
CGCGCTCTGCATCGTCGCGCCGTGGACGTTCGCCCTCACTCCGCTGTTCGGCATCGTGGCCGCACTGGGCTTCGCCTGGC
TGGGTATCGTGCGGCTGAAGCAGGCCGGCGTGGTGCTCCGCTACCGGCGGAACATCCGCCGACTGCCGAAGTACACGATG
ACCAGTGCCGAAATGCCGGTCAGCAACGAACACTTGTTCATCGGTAAAGGATTTCGCTGGACGCAGAAGCATACGCAGCG
CCTGGCAGATACCTACCTGCCCCAGTTCGCCTCCTACGTCGAGCCCTCGCCGCTCTACGAGCGCGCGCGCCGGCTGGAGA
AGCAGCTTGAGTTCGCCCCCTTCCCCCTCAAGCTGGTCGCCAAAGCCACTGCCTGGGACGTGGCCTGGAACCCCGCACGG
CCGCTGCCGCCCGTGGGCGGTTTGCCTCGGCTCCATGGCATCGAGCCGCGCGAACAGGACGTAGGCCTGCAACTGGGCGA
GCGCGTCGGCCACACACTGGTACTCGGCACCACGCGGGTGGGTAAGACGCGACTCGCGGAGCTGTTCATCACCCAGGATA
TTCGCCGCACCCACTGCCGAGGCCGACGCCAGCGAGTGAAGATGGGCCGGCGGACCCAGACGGTTCACCACGGCTATCGG
CGCCAGCGCGCAGAGGAGCAGCCGGACTACGAGGTGGTGATCGTCTTCGACCCGAAAGGCGACGCTGACTTGCTGAAGCG
TATGTACGTGGAATGCGAACGTGCCGGCCGCCTGGACGAGTTCTACGTGTTCCACCTCGGTCATCCTGACCTGTCGGCAC
GCTACAACGCCGTCGGCCGGTTCGGTCGGATCTCCGAGGTCGCCACACGCGTCGCCGGCCAGCTCTCCGGCGAGGGCAAC
AGCGCGGCGTTCCGCGAGTTCGCCTGGCGGTTCGTCAACATCATCGCCCGCGCGCTGCACGCGCTGGGTATCCGGCCTGA
CTACCAGCAGATCCTCCGGCACGTCGTGAACATCGATGCGTTGTTCGTCGAATATGCGCAGAAATACATCAGCGAGCACG
ATCCCAGGGCCTGGGACACCATCATCCAGATCGAGGGCAAGCTCAACGACAAGAACATCCCGTTCAACATGAAAGGACGG
CCCCTGCGGGTCGTAGCCATCGACCAGTACCTGACACAGAAACGCATCGCCGACCCGGTCATGGAAGGCCTGAAGAGCGC
CGTGCGCTACGACAAGACCTACTTCGACAAGATCGTGGCCTCGCTGCTGCCGCTACTGGAGAAACTCACTACCGGGCGGA
TCTCGGAGCTTCTTTCGCCCAACTACGCGGACCTCAACGATCCGCGACCGATCTTCGACTGGATGCAGGTCATCCGCAAG
CGCGCCGTGGTCTACGTCGGCCTCGACGCACTATCGGATACCGAGGTCGCCGCCGCGGTGGGCAACTCCATGTTCAGCGA
CCTGGTCTCGGTGGCGGGTCACATCTACAAGCATGGAGTCGATGACGGCCTGCCCGGCTCACTCGCCGGCGGCAAGGTCC
GCATCAACCTGCATGCCGACGAGTTCAACGAGCTGATTGGCGACGAGTTCATCCCCATGGTCAACAAAGCGGGCGGCGCC
GGTGTGCAAGTGACGGCCTACACCCAGACCATGAGCGACATCGAGGCCAAGATCGGCTCCCGCGCGAAGGCCGGTCAGAT
CATCGGCAACTTCAACAACCTGTTCATGCTGCGGGTGCGCGAGACCGCCACGGCCGAACTTCTGACCAACCAGCTCCCCA
AAGTCCAGATCTACACCAGCACGCCAGCGAGCGGCGCCAACGACGCGATCAACAACAAGAAGGCAGCCTTCACCTCCAGC
TCGCACGACCAGGTGCAGATGACCAGCGTGCCGATGCTCGAGCCGGCCCACATCGTTGGTCTGCCCAAAGGACAAGCGTT
CGCGCTACTCGAGGGCGGCAATCTCTGGAAGATCCGAATGCCGCTGCCGGCGGTCGATCCCGACGAGGTGATGCCGAAAA
GCCTGCAGGAGCTGGCTGCCGGTATGCGCAAGGGCCAGGCCGCAAACAGCGAGTGGTGGGAGGCACCGGGATACTCCGCC
CTGCAGGATGGTCTGCCCCAGGACCTGGTCGACGATTTCCGTCACCTCGGCGCCGGTGAGGATGCCGCCTGA

Protein sequence :
MAGQYPLEALLRPAVELYTTTVCFTAAALCIVAPWTFALTPLFGIVAALGFAWLGIVRLKQAGVVLRYRRNIRRLPKYTM
TSAEMPVSNEHLFIGKGFRWTQKHTQRLADTYLPQFASYVEPSPLYERARRLEKQLEFAPFPLKLVAKATAWDVAWNPAR
PLPPVGGLPRLHGIEPREQDVGLQLGERVGHTLVLGTTRVGKTRLAELFITQDIRRTHCRGRRQRVKMGRRTQTVHHGYR
RQRAEEQPDYEVVIVFDPKGDADLLKRMYVECERAGRLDEFYVFHLGHPDLSARYNAVGRFGRISEVATRVAGQLSGEGN
SAAFREFAWRFVNIIARALHALGIRPDYQQILRHVVNIDALFVEYAQKYISEHDPRAWDTIIQIEGKLNDKNIPFNMKGR
PLRVVAIDQYLTQKRIADPVMEGLKSAVRYDKTYFDKIVASLLPLLEKLTTGRISELLSPNYADLNDPRPIFDWMQVIRK
RAVVYVGLDALSDTEVAAAVGNSMFSDLVSVAGHIYKHGVDDGLPGSLAGGKVRINLHADEFNELIGDEFIPMVNKAGGA
GVQVTAYTQTMSDIEAKIGSRAKAGQIIGNFNNLFMLRVRETATAELLTNQLPKVQIYTSTPASGANDAINNKKAAFTSS
SHDQVQMTSVPMLEPAHIVGLPKGQAFALLEGGNLWKIRMPLPAVDPDEVMPKSLQELAAGMRKGQAANSEWWEAPGYSA
LQDGLPQDLVDDFRHLGAGEDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 100
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 99
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 99
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 73
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 70
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 70
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 58
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 58
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 2e-171 58
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 57
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 56
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 56
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 0.0 54
traD AAW83057.1 TraD Not tested GGI Protein 2e-134 47