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Name : PSPA7_4471 (PSPA7_4471) Accession : YP_001349821.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : type IVB pilus formation outer membrane protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 4604150 - 4605859 bp Length : 1710 bp Strand : + Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00263; match to protein family HMM PF07655; match to protein family HMM TIGR02520 DNA sequence : ATGCGTGCCCCCCTGAAGAACCTCTTGCCTTGCCTCCTGATCCCCGCGCTGGCCAGTTGCTCGGTCGCACGGGTGAACGA GTCGGCGGATCGTGTCGAAGCTACGGCAGATTCCGCGTCGACGATCGCAGCACAGATGCGCAACACCCGACCGGATCGCC GCGATACGGTGGTGTTCTCCGACAAACCCTGGGTCAGCACGAAGCCCCTGAGCGTTTCGCACACCTTGTCCAGTGACTGC ATCGTGACGTGGCGCCCTGCAGGCGCAGCGTCGCTGCAGGAGGCCGCCCAGGAAGTCATCAACCAATGCCACCTGGCGGT CAGTATCACGCCCGACGCGCTGAACCCGGCCGCTTTTGCCCTGCAACCTCAGCAGCGCGCGAGCAACGCCCCGCCGCCCA TCCAAGGCGGCCAGGACATGGCCACCATGCTGTTTCCTGCCTCCGTCGCCAACGGCATGTCCCTAGGTGCCGGCGGCAGC ATGGGATCGAGCTTCGGGTCCTACGGCCCGCGGTCGCTGTACAACATCAAATGGAACGGCAAGGTCAGCGGGTTCCTCGA TCTCATCGCCGCCCGCGCCGGCGTGTCCTGGCGCTACAACCCAACCGAGAAACGGGTCGAGTTCTACTACCTGGACACTC GGACCTTCCGCATCTACGCCTTCGACGACGTCAACACGGTGGACTCCACCGTGCGTTCCGGTATGACGACGGCCGCCGGC ATCAGCGGGGACGGCTCCGGATCCACTGGACAGAATGGCAGCTCCGGCATCAGCGGCGACTCCGGCAGCAAGCAGACCAC CAGCTCCGAGCTGAAGACCTCGATCCTCAGCGACATAGAGAACAGCATCAACTCGATGCTGACGCCGAGCATGGGACGCA TGTCGCTGTCGCGTGCCACGGGCACCCTGACCGTCACCGACCGACCAGAGGTCCTCAACCGCGTCCAGCAGTTGGTCAAC CGGGAGAACGAGAGCATCACCAAGCAGGTGCTGCTGAACGTCAACGTGCTCTCGGTCGCCCTGACCGACAAGGATCAACT GGGGATCGACTGGAACCTGGTCTACAAGTCGCTCAACAACAAGTGGGGCATCGGCCTGAAGAACACCATGCCAGGCATCG ATCAAAGCGCGATCTCCGGCTCCGTGAGCATCCTGGATACCGCCAACAGTGCCTGGGCAGGATCCAAGGCCATGGTCCAG GCGCTGGCCCAGCAGGGTCGCGTCTCGACCGTCCGCTCCCCGTCCGTGACCACGCTCAACCTCCAGTCGGCGCCGATCCA GATCGGCCGCTACGACAGCTACCTGGCCTCCAGCCAGATCTCCAACGTCGCCCAGGTCGGCAGTACCACCTCGCTGATCC CGGGCGCCGTGACCAGCGGCTACAACATGAGCCTGCTGCCGTTCGTGATGGAAAGCGGCGAGATGCTGCTGAAGATCAAC ATCAACATGACCTCCAGACCGACGTTCGAAATGCAGACCAGCGGGGACTCCAAAGCCCAGTTCCCGAGCTACGACATACA ACTGTTCGACCAGAAGGTACGCCTGCGCAGCGGCGAGACCTTGGTGCTCTCCGGCTTCGACCAGACCACCGAGGATACCA ACAAGGTCGGCACCGGCGACGCCGGATTCTTCGGCCTTGGCGGCGGGCTGACCCGCAATACCAAACGCGAGGTCATCGTG GTGCTGATCACCCCCGTCGTGCTGGGCTGA Protein sequence : MRAPLKNLLPCLLIPALASCSVARVNESADRVEATADSASTIAAQMRNTRPDRRDTVVFSDKPWVSTKPLSVSHTLSSDC IVTWRPAGAASLQEAAQEVINQCHLAVSITPDALNPAAFALQPQQRASNAPPPIQGGQDMATMLFPASVANGMSLGAGGS MGSSFGSYGPRSLYNIKWNGKVSGFLDLIAARAGVSWRYNPTEKRVEFYYLDTRTFRIYAFDDVNTVDSTVRSGMTTAAG ISGDGSGSTGQNGSSGISGDSGSKQTTSSELKTSILSDIENSINSMLTPSMGRMSLSRATGTLTVTDRPEVLNRVQQLVN RENESITKQVLLNVNVLSVALTDKDQLGIDWNLVYKSLNNKWGIGLKNTMPGIDQSAISGSVSILDTANSAWAGSKAMVQ ALAQQGRVSTVRSPSVTTLNLQSAPIQIGRYDSYLASSQISNVAQVGSTTSLIPGAVTSGYNMSLLPFVMESGEMLLKIN INMTSRPTFEMQTSGDSKAQFPSYDIQLFDQKVRLRSGETLVLSGFDQTTEDTNKVGTGDAGFFGLGGGLTRNTKREVIV VLITPVVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13431.1 | putative PilN | Not tested | PAGI-5 | Protein | 0.0 | 99 |
| pilN2 | AAP84210.1 | PilN2 | Virulence | PAPI-1 | Protein | 0.0 | 99 |
| pilN | CAI36059.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 8e-103 | 49 |
