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Name : PSPA7_4420 (PSPA7_4420) Accession : YP_001349771.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Unknown Product : ABC transporter permease/ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 4554834 - 4556651 bp Length : 1818 bp Strand : - Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAGCGCCCTTGAAGCCAACGACACGCCGGCCAACGAGCCTGCGCCGCTGGGCCAGATCCTGCGCCCGATCCGTAGCCG CCTGATCTGCGCCGCCACCCTGGCAGGCCTGGGTGCGGCGCTGACGCTGGTGCCGCTGGCCGGTATCGCCCATATCGCAC AGATTGCGCTCGGCGCTGTCGCCACCCATGCCACCGAAGCCACGGTCCACGGCGAACTCTGGCGGACGGTGGCCCTCAGC ATCGCCAGCCTGTTCGGCGGCCTGCTACTGATCCTGCTGGCCGAAGCCACGGCGCACGCGGCCGACAACCGCCTGACCCA CCACCTGCGGCTAGCCGCGGCGCGTCGGCTGGCGAAGGTGCCGCTGGGCTGGTTCGGCTCGCGCTCGTCGGGCGAGATCA AGCACGCCATGCAGGACGACATCGGCACCCTGCACGACCTGACCGCACATTTCTACACCACCCTGGGGCGCACGCTCGGT GTCATCCTGACCTCGCTGGTCTATCTGTTCGCGCTGGATTGGCGCCTGGCACTGGTAGCGCTCCTGCCCTACGTAGGCGG GTTGCTGCTGATCGGTTCGGCTATGAACTTCAGCGAACGTCAGATGCAGGCCTTCGGCGCAGGACAAGCGCGCGTGGACA ATGCGGTAGTCGAGTTCGTCAACGGCATTCCGGTCATCAAGACCTTCGGCGCCGGCGGCAGGGCTCACGGCAACTATCGG ACCGCGGTGGACGATTTCCTAGAAGTATTTCTCCAGTTGCTACAGCCGACGCTCGGCTCCATGAGCATCGCCAACGCACT GATGGCGCCGGTCGCGGTGTTGGGCGTGGTGCTTGCGGCAGGCACACTGTTCGTGCATCTCGACTGGATGACCCCGGCGG CAGTTCTGCCCTTTGTCCTGGTGGCTCCCGGGGTGTCTGCTCCGCTGATGCTGCTGATCTTCATTGCGCACGGACTGGAC CCCGCGAAGGGAGCGGCTCGGCGTGTGCAGGACCTGTTGCGTACCGCAGTGCTGGAACAACCTGCGGCAGCATTGCGGCA GACGCCCACCGGCAGCGAGATTCGCATTGAGCAGGTAGGCTACACCTACGACGCGCAGCACAAAGTGCTCGCGAACCTGA ATCTCACACTTGAACCCGGCACAGTTACCGCATTGGTCGGTCCTTCCGGCGCTGGCAAGTCCACCCTGGCGCGACTGCTG CTGCGTTTCTTCGATCCGAGCGAAGGGCGCATAACGTTAGGTGGTGCAGACCTGCGGAACCTCGAAAGTACCGAGTTGTA CCGGCACATTGGTTTCGTCCTGCAGGACGTGCGGCTGATCCATGCCAGCGTGCATGACAACATCGCGCTGGGCCGTCCCT CGGCGGCCCGGTCGGAAATCGAGAACGCCGCGCGCGCAGCCAATATCCACGAACGCATCCTGAGCCTGCCACGCGGCTAC GACTCGGTAATCGGCGAGGACGCGCATCTCTCCGGCGGCGAACAACAACGCGTGAGCATCGCTCGCGCGATTCTGCTGGA CCCGCCGGTGTTGGTACTGGATGAAGCCACCGCCGCCGCCGACGCCGAAAACGAAGTGGCCATCCAGGAAGCGCTTTCGC GCTTCGCCCACGGGCGCACGCTCCTAGTCATCGCACATCGGCTCGATACCGTAATGCACGCAGACCGCATTGTCGTGATC GACAATGGCACCGTCATAGAGCAAGGGCGCCACGAGGAGTTGCTGGCGCGCAACGGGCACTACGCTCGCCTGTGGGAACT GGGCGGCTATGGCGATGCGCAGGCCGCGCAAAGAATCGGAGGCCAGGTGACGCAATGA Protein sequence : MSALEANDTPANEPAPLGQILRPIRSRLICAATLAGLGAALTLVPLAGIAHIAQIALGAVATHATEATVHGELWRTVALS IASLFGGLLLILLAEATAHAADNRLTHHLRLAAARRLAKVPLGWFGSRSSGEIKHAMQDDIGTLHDLTAHFYTTLGRTLG VILTSLVYLFALDWRLALVALLPYVGGLLLIGSAMNFSERQMQAFGAGQARVDNAVVEFVNGIPVIKTFGAGGRAHGNYR TAVDDFLEVFLQLLQPTLGSMSIANALMAPVAVLGVVLAAGTLFVHLDWMTPAAVLPFVLVAPGVSAPLMLLIFIAHGLD PAKGAARRVQDLLRTAVLEQPAAALRQTPTGSEIRIEQVGYTYDAQHKVLANLNLTLEPGTVTALVGPSGAGKSTLARLL LRFFDPSEGRITLGGADLRNLESTELYRHIGFVLQDVRLIHASVHDNIALGRPSAARSEIENAARAANIHERILSLPRGY DSVIGEDAHLSGGEQQRVSIARAILLDPPVLVLDEATAAADAENEVAIQEALSRFAHGRTLLVIAHRLDTVMHADRIVVI DNGTVIEQGRHEELLARNGHYARLWELGGYGDAQAAQRIGGQVTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 1e-66 | 42 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 9e-67 | 42 |
