Gene Information

Name : PSPA7_4187 (PSPA7_4187)
Accession : YP_001349541.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : 2.3.1.28
Position : 4325547 - 4326185 bp
Length : 639 bp
Strand : -
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00302

DNA sequence : 
ATGAGTTATACGAGAGTGGATATTTCGTCCTGGAACAGGCGGGAGCACTTCGAAATATTCAGAGGCGACGGGCAGTGCAC
GTTCAGCCAGACGGTTCAACTCGATATCACGCGGCTGCTCGACTTCACCAGGTCCAGGGGCTACAGGTTCTATCCGGTGT
TCATTCACTCGATTGCGAAAGTGGTGAACCGGTTCCCGGAATACCGGATGGCCATGAAAGGCGACGAGCTGATCGTCTGG
GACTGCGTCCATCCCAACTACACGACCTTCCATCCCGATACCGAGACATTCTCGTCCTTCTGGAGCCACTACCACGATGA
TCTGGCGCGTTTCCTCGCCGAATATTCCATGGACAGGGAAAAATACCGGAACGACCATTCGTATTTCCCCAAGGGTTTCA
TCGAGAATGTCTTCTACGTCTCGGCTAATCCCTGGGTAAGCTTCACCAGCTTCGATTTCAACTTCGCCAGCGCGAACAAC
TTCTTTGCGCCGTTGTTCACCGTCGGAAAGTACTATTCCCAGGCCGGCAAGACACTCGTTCCCCTGGCGGTGCAGGTACA
CCACGCCGTTTGCGATGGGTTCCACGCCGCCCGCCTGGTCACCGAGTTGCAGAAACTCTGCGACGAGGCAGGCGGCTAG

Protein sequence : 
MSYTRVDISSWNRREHFEIFRGDGQCTFSQTVQLDITRLLDFTRSRGYRFYPVFIHSIAKVVNRFPEYRMAMKGDELIVW
DCVHPNYTTFHPDTETFSSFWSHYHDDLARFLAEYSMDREKYRNDHSYFPKGFIENVFYVSANPWVSFTSFDFNFASANN
FFAPLFTVGKYYSQAGKTLVPLAVQVHHAVCDGFHAARLVTELQKLCDEAGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 4e-57 63
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 3e-57 63
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 4e-55 61
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 6e-44 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_4187 YP_001349541.1 chloramphenicol acetyltransferase NC_010558.1.6276004. Protein 2e-57 63
PSPA7_4187 YP_001349541.1 chloramphenicol acetyltransferase NC_010410.6002590.p0 Protein 2e-57 63
PSPA7_4187 YP_001349541.1 chloramphenicol acetyltransferase NC_011586.7045194.p0 Protein 2e-57 63
PSPA7_4187 YP_001349541.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 8e-60 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_4187 YP_001349541.1 chloramphenicol acetyltransferase VFG1032 Protein 2e-55 61