Gene Information

Name : kdpE (PSPA7_3636)
Accession : YP_001348990.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : two-component response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3764620 - 3765312 bp
Length : 693 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGACCCAATTGCAGAACACCATCCTGCTGATCGACGACGAGCCGCAGATCCGCAAGTTCCTCCGCATCAGCCTCACCGC
CCAGGGTTACCGGGTTCTGGAGGCCGGCAACGGCGAGGAGGGGCTGGCCCAGGCCGCGTTGAACCGGCCGGACCTGGTGG
TACTCGACCTCGGCCTGCCGGACCGCGACGGCCAGGACATTCTCCGCGACCTGCGCGAATGGTCGGCGGTGCCGGTGCTG
GTGCTGTCGGTGCGCGCCAGCGAGGGCGAGAAGGTGCTGGCCCTGGACGGCGGCGCCAACGACTACGTGACCAAGCCGTT
CGGTATCCAGGAGTTCCTCGCCCGCGTTCGCGTCCTGTTGCGCCAGGCGGCGCAGGGCGAGAGCCCTGAGGCGGCGGTGA
CGGTCGGCCCGCTGCAGGTCGACCTGGCCTACCGCCGGGTCAGCCTGGCCGGCGCCGAGGTGGCGCTGACCCGCAAGGAA
TACGCGGTGCTCGCCGCGCTGGCGCGCCATCTAGGCCGGGTGGTGACCCAGCAGCAACTGCTCAGGGATATCTGGGGGCC
GACCCACGTCGAGGATACCCACTACCTGCGGGTGGTGGTCGGCCACCTGCGCCAGAAGCTCGGTGACGACCCGGCGAGCC
CACGCTTCCTGGTTACGGAGGCGGGTGTCGGCTACCGCCTGCGCGATAGCTGA

Protein sequence :
MTQLQNTILLIDDEPQIRKFLRISLTAQGYRVLEAGNGEEGLAQAALNRPDLVVLDLGLPDRDGQDILRDLREWSAVPVL
VLSVRASEGEKVLALDGGANDYVTKPFGIQEFLARVRVLLRQAAQGESPEAAVTVGPLQVDLAYRRVSLAGAEVALTRKE
YAVLAALARHLGRVVTQQQLLRDIWGPTHVEDTHYLRVVVGHLRQKLGDDPASPRFLVTEAGVGYRLRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-36 43
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 4e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_001348990.1 two-component response regulator KdpE VFG1389 Protein 1e-27 43