Gene Information

Name : PSPA7_3614 (PSPA7_3614)
Accession : YP_001348968.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 3742921 - 3744396 bp
Length : 1476 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355

DNA sequence :
ATGAGCACGAATGCTGCACAGCAAAACCGGAACGAGAACGGTGAGTACAACATTCTCGACAGCATCATTGCCGAAACTCG
CTTGAGCCCGGACGACGAGGCCTACGACATTGCCAGGCGTGGTGTGTCGGCCTTCATTGAGGAACTGCTCAAGCCGCAGA
ACGAAGGCGAGCCGGTGAAGAAGGCGATGGTAGATCGGATGATCGCCGAGATCGATGCCAAGCTCGGCAGTCAGATGGAC
GAGATCCTCCATCATCCGGACTTCCAGGCCCTGGAGTCGGCCTGGCGCGGCCTGCAATTGCTGGTCGACCGCACGAACTT
CCGCGAGAACATCAGGATCGAGATCCTCAGCGTATCCAAGGAGGACTTGCTGGACGATTTCGAGGACTCGCCGGAGGTAA
TGCAATCCGGCCTGTACAAGCATATCTATACCGCAGAATATGGACAGTTCGGTGGCCAGCCGGTCGGCGCGATCATCGCC
AACTACTACCTGTCGCCCAGCTCGCCGGACGTCAAGCTGATGCAGTACGTCTCCAGCGTGGCCTGCATGGCCCACGCGCC
GTTCGTGGCCGCTGCCGGGCCAAAGTTTTTCGGCCTGGAGAGCTTTACCGGGCTGCCGGACCTGAAGGACCTGAAGGATC
ACTTCGAAGGCCCGCAGTTCGCCAAGTGGCAGAGCTTCCGCCAGTCCGAGGATTCTCGCTATGTGGCGCTGACCGTCCCG
CGATTCCTGCTGCGCACGCCTTACGATCCGGAAGAAAACCCGGTCAAATCGTTCGCCTACAAGGAGACCGTGGCCAACAG
CCACGAGCACTACCTGTGGGGCAACACCGCCTATGCCTTTGGTACCAGGCTGACCGACAGCTTCGCCAAGTACCGTTGGT
GCCCGAACATCGTCGGGCCGCAGAGCGGCGGCGCGGTGGAGGACTTGCCGCTGCATCACTTCGAAAGCATGGGCGAGATC
GAGACCAAGATTCCTACCGAGGTGCTGGTGTCCGATCGCCGCGAATTCGAGTTGGCCGAGGAAGGCTTCATTTCCCTGAC
CATGCGCAAGGGTAGCGATAACGCAGCGTTCTTTTCCGCCAGTTCGGTGCAGAAGCCGAAGTTCTTCGGTATCAGTGCCG
AAGGCAAGGCTGCGGAGCTGAACTACAAGCTCGGTACCCAACTGCCGTACATGATGATCGTCAACCGCCTGGCCCATTAC
CTGAAGGTGCTGCAACGCGAGCAACTGGGCTCTTGGAAGGAACGCACCGACCTGGAACTGGAACTGAACAAGTGGATCCG
CCAGTACGTTGCCGACCAGGAAAACCCCAGCGCCGAGGTCCGCGGCCGGCGTCCTCTGCGTGCCGCGCAGATCATCGTCA
GTGATGTCGAGGGTGAGCCGGGCTGGTACCGCGTCAGCTTGAACGTGCGTCCGCACTTCAAGTACATGGGGGCGGACTTC
ACCCTGTCGTTGGTCGGCAAGTTGGACAAGGAGTAA

Protein sequence :
MSTNAAQQNRNENGEYNILDSIIAETRLSPDDEAYDIARRGVSAFIEELLKPQNEGEPVKKAMVDRMIAEIDAKLGSQMD
EILHHPDFQALESAWRGLQLLVDRTNFRENIRIEILSVSKEDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIA
NYYLSPSSPDVKLMQYVSSVACMAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVP
RFLLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTRLTDSFAKYRWCPNIVGPQSGGAVEDLPLHHFESMGEI
ETKIPTEVLVSDRREFELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHY
LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-164 63
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-164 63
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 3e-157 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_3614 YP_001348968.1 hypothetical protein VFG2093 Protein 0.0 69
PSPA7_3614 YP_001348968.1 hypothetical protein VFG2475 Protein 7e-173 67
PSPA7_3614 YP_001348968.1 hypothetical protein VFG2070 Protein 2e-84 42