Gene Information

Name : PSPA7_3610 (PSPA7_3610)
Accession : YP_001348964.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3736884 - 3739511 bp
Length : 2628 bp
Strand : -
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM T

DNA sequence :
ATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTGGAGGGCTCCGCCGAGCG
CTGCGTCGCCCGCGGCGGCAGCAGGGTACTGGTGGAAGACCTGTTGCTGGGCCTGCTGGAGCGTCCCCAGGGATTGCTGG
CGCGCGCCCTGCAGGATGCCGCGGTGGACGCCGGCGAACTCAACGCCGCGTTGCAAGCGCGCGGCGAGCACAGTGCCTCG
CGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCGCTGTTGCTGGCCAACCTCGAACTGGGCCGTAG
CCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCTACCAGCCACTGC
TGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAGCCGGGT
GGCGGCGAGTCCCTGTTGCAGCGTTTCACCCACAACCTTACCCAGCAGGCGCGCGACGGCAAGCTCGATCCGGTGCTCTG
TCGCGACGGGGCTATTCGCCAGATGGTCGACATCCTGGCCCGTCGGCGGAAAAACAACCCCATCGTGGTCGGCGAGGCTG
GCGTCGGCAAGACCGCCATCGTCGAAGGCCTGGCCTCGCGGATCGCCGCAGGGGAAGTGCCGCCGGCACTGAGGGACGTC
GAGCTGTTGTCCCTCGACATGGGCCTGTTGCAGGCCGGTGCCAGCGTGAAGGGCGAGTTCGAGCGGCGCCTGAAAGGCGT
CATCGACGAAGTGAAGGCAGCACTCAGGCCTACCATCCTGTTCATCGACGAGGCCCATACGCTGATTGGCGCGGGCGGTC
AGGCCGGCGGCTCGGATGCCGCCAACCTGCTCAAGCCGGCCCTGGCACGCGGTGAGTTGCGTACCATCGCGGCGACGACC
TGGGCCGAGTACAAGAAGTATTTCGAGAAGGACCCGGCGCTGGCCCGGCGTTTCCAGCCCGTGCAACTGCATGAGCCGAG
CGTTGCCGAAGCGGTGACAATCCTGCGTGGCCTGGCCCGTGTTTACGAGGAAAGCCACGGTATCTACCTGCGCGACGACG
CGGTGGTGGCCGCCGCCGAACTGTCCGCCCGCTACCTGGCGGGTCGCCAGTTGCCGGACAAGGCCGTCGACATCCTCGAC
ACCGCCTGTGCGCGGGTGCGCATCAGCCTGGCGGCGGCGCCGGAGAGTCTCGAGCGCCTGCGCGGCGAGCTGGCCGAAGG
CGAGCGCCAGCGCCAGGCCCTGCGCCGCGATGCCGAGGCAGGGCTGCCGATCGACCACGAGGCCCTGCAGGTGCTGGAAG
AACGCCTGGCCCAGGCGGAAAGCGAGCGGCACGTACTGGAGGACCAGTGGAGCCGCCAGCGCGAACTCGCCGAGCGCCTG
CTCGCCCTGCGCCAGCAATTGGCCAGGGCCCGCGAGGCGAGCCGGGAAGAACAGGGCGGCGAGGCGGACGCGGAGGCTTT
CCCGGCCGACGAGCATGGCGGTGTCGAAGCCCTGGAAAAGGCCCTTCACGAAACCCGCCAGGCACTCGCCGATGCCCAGG
CCCAGGGGCGGCTGGTCAGTTTCGAGGTCTGCCCGCGCCTGGTCGCCGAGGTGATCAGCGCTTGGACCGGTGTACCGGTG
GAGCAACTGGCGCGGGAGCACAATGCCAAGGTGGTGGGGTTCGCCGACGACCTGCGGGCGCGAATCCGGGGCCAGGAACA
GGCGATCAGGGCACTGGACCGTTCGATGCGCGCCACCGCGTCAGGGCTGAACAAGCCCGATGCGCCGGCCGGTGTGTTCC
TTCTGGTGGGGCCGAGCGGGGTGGGCAAGACCGAGACCGCGCTGGCGCTAGCCGACCTGCTGTATGGCGGCGAGCGTTTC
ATCACCACCATCAACATGTCCGAATTTCAGGAGAAGCACTCCGTCTCGCGCCTGATCGGTGCACCGCCCGGATATGTCGG
CTATGGCGAGGGTGGCATGCTCACCGAGGCGGTACGCCAGAAGCCCTATTCGGTGGTGTTGTTGGACGAAGTGGAGAAGG
CCGATCCGGACGTGCTCAACCTCTTCTACCAGATATTCGACAGGGGTGTAGCCAACGATGGCGAAGGGCACGAGATCGAT
TTCCGCAACACCCTGTTCCTGATGACCTCCAACCTCGCCAGCGAACGTATCGCCGCGCTTTGCCGGGACGGCGAGCGGCC
GTCCCCCGAGATTCTCGAAGACACCATCCGCCCGGTGCTCAGCCAGCATTTCAAACCGGCGTTGCTGGCACGGATGCGGG
TGGTGCCGTACTACCCGGTGGGCGGCAGGGTGCTGCGAGAGCTGATCGGGATCAAGCTGGACCGGCTCGGCGAGCGCCTG
GCCCGCCGCCACCTGGCTTTCGACTACAGCTCTGCGCTGGTGGATCACCTGGGTGAACGTTGCATCCAGAGCGACAGTGG
CGCCCGGCTGATCGATCATCTGCTGGACACTCATCTTCTGCCTCTGGTGGCCGACCGGTTGCTGCAGGCGATGGCGCGCG
ACGAGCGGCTCGTACGGGTTCACGCGACACTCGACGAGCACGGACACGTGTTCTGCGAGTTCGCCTGA

Protein sequence :
MINVDLQQLIQALDADTRRDLEGSAERCVARGGSRVLVEDLLLGLLERPQGLLARALQDAAVDAGELNAALQARGEHSAS
RNPVFAPELVQWLQDALLLANLELGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPG
GGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALRDV
ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILFIDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAATT
WAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDILD
TACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHEALQVLEERLAQAESERHVLEDQWSRQRELAERL
LALRQQLARAREASREEQGGEADAEAFPADEHGGVEALEKALHETRQALADAQAQGRLVSFEVCPRLVAEVISAWTGVPV
EQLAREHNAKVVGFADDLRARIRGQEQAIRALDRSMRATASGLNKPDAPAGVFLLVGPSGVGKTETALALADLLYGGERF
ITTINMSEFQEKHSVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDRGVANDGEGHEID
FRNTLFLMTSNLASERIAALCRDGERPSPEILEDTIRPVLSQHFKPALLARMRVVPYYPVGGRVLRELIGIKLDRLGERL
ARRHLAFDYSSALVDHLGERCIQSDSGARLIDHLLDTHLLPLVADRLLQAMARDERLVRVHATLDEHGHVFCEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-151 46
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-151 46
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-122 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_3610 YP_001348964.1 type VI secretion ATPase VFG2076 Protein 5e-153 50
PSPA7_3610 YP_001348964.1 type VI secretion ATPase VFG2084 Protein 1e-148 47