Name : PSPA7_3478 (PSPA7_3478) Accession : YP_001348838.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : putative Orn/Arg/Lys decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 3601478 - 3603733 bp Length : 2256 bp Strand : - Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711 DNA sequence : ATGTATAAAGACCTCAAATTTCCCGTCCTCATCGTCCATCGCGACATCAAGGCCGACACCGTTGCCGGCGAACGCGTGCG GGGCATCGCCCACGAGCTGGAGCAGGACGGCTTCAGCATTCTCTCCACCGCCAGTTCCGCCGAAGGACGCATCGTCGCCT CGACCCATCACGGCCTGGCCTGCATCCTGGTCGCCGCCGAAGGCGCCGGGGAAAACCAGCGCCTGCTGCAGGATGTGGTG GAGCTGATCCGCGTGGCCCGCGTGCGGGCGCCGCAACTGCCGATCTTCGCCCTTGGCGAGCAGGTGACCATCGAGAACGC CCCTGCCGAGTCGATGGCCGACCTGCACCAGTTGCGCGGCATCCTCTATCTGTTCGAGGACACCGTGCCGTTCCTCGCCC GCCAGGTCGCCCGCGCGGCGCGCAACTACCTGGCCGGCCTGCTGCCGCCGTTCTTCCGCGCGCTGGTCGAGCACACCGCG CAGTCCAACTACTCCTGGCACACGCCGGGCCACGGCGGTGGCGTCGCCTACCGGAAGAGCCCGGTGGGACAGGCGTTCCA CCAGTTCTTCGGGGAGAACACGCTGCGTTCGGACCTGTCGGTCTCGGTCCCCGAACTGGGCTCGCTGCTCGATCACACCG GTCCCCTGGCCGAGGCCGAGGACCGCGCCGCGCGCAACTTCGGCGCGGACCACACGTTCTTCGTGATCAACGGCACTTCC ACCGCGAACAAGATCGTCTGGCACTCGATGGTCGGCCGCGAGGACCTGGTGCTGGTTGATCGCAACTGCCACAAGTCGAT CCTCCATTCGATCATCATGACCGGGGCGATCCCGCTCTACCTGACCCCGGAGCGCAACGAACTGGGCATCATCGGGCCGA TCCCGCTGAGCGAGTTCAGCCGGGAGTCGATCGCCGCGAAAATCGCCGCCAGCCCGCTGGCGCGTGGCCGCGAACCGAAG GTGAAGCTGGCGGTGGTGACCAACTCCACCTATGACGGCCTGTGCTACAACGCCGAGCTGATCAAGCAAACCCTCGGCGA CAGCGTCGAGGTGCTGCACTTCGACGAGGCCTGGTACGCCTATGCGGCGTTCCACGAGTTCTACGACGGCCGCTATGGCA TGGGCACCTCGCGCAGCGAGGCGGGCCCCCTGGTGTTCGCCACCCACTCCACGCACAAGATGCTCGCCGCCTTCAGCCAG GCCTCGATGATCCACGTGCAGGACGGCGGCGCGCGCCAGCTGGACGTGGCGCGCTTCAACGAAGCCTTCATGATGCACAT TTCCACCTCGCCGCAGTACGGCATCATCGCCTCGCTGGACGTGGCCTCGGCGATGATGGAGGGGCCCGCCGGGCGCTCGC TGGTCCAGGAAACCTTCGACGAGGCCCTGAGCTTCCGCCGCGCCCTGGCCAACGCGCGACAGAACCTCGGTCGTGGCGAC TGGTGGTTCGGCGTCTGGCAGCCGGAGCAGGTGGAGGGCACCGACCAGGTGCGCACCGGCGACTGGGTGCTGGAGCCGAG CGCCGATTGGCACGGCTTCGGCGACATCGCCGAAGACTACGTGTTGCTCGACCCGATCAAGGTCACCCTGACCACGCCGG GGCTGAGCGCCGGCGGCAAGCTCGGCGAGCAGGGCATTCCCGCCGCCATCGTCAGCCGTTTCCTCTGGGAGCGTGGCCTG GTGGTGGAAAAGACCGGCCTGTATTCCTTCCTGGTGCTGTTCTCGATGGGCATCACCAAGGGCAAGTGGAGCACCCTGGT CACCGAACTGCTCGAGTTCAAGCGTTGCTACGACGCCAACCTGCCGCTCGTCGATGTCTTGCCTTCGGTGGCCCAGGCCG GCGGCAAGCGCTACAACGGCATGGGTCTGCGCGACCTCAGCGACGCCCTGCACGCCAGCTATCGCGACAATGCCACGGCG AAGGCCATGAAGCGCATGTACACGGTGTTGCCGGAAGTCGCGATGCGTCCGTCCGAGGCCTACGACAAGCTGGTCCGCGG CGAGGTCGAGGCGGTACCGATCGCCCAACTGGAAGGGCGCATCGCCGCCGTCATGCTGGTACCCTATCCGCCGGGCATCC CGCTGATCATGCCGGGTGAGCGCTTCACCGAGGCGACCCGCTCGATCCTCGACTATCTCGAGTTCGCGCGGACCTTCGAG CGCGCCTTCCCCGGCTTCGATTCCGATGTGCACGGCCTGCAGCATCAGGACGGACCGTCCGGGCGCTGCTATACCGTTGA ATGCATAAAGGAATGA Protein sequence : MYKDLKFPVLIVHRDIKADTVAGERVRGIAHELEQDGFSILSTASSAEGRIVASTHHGLACILVAAEGAGENQRLLQDVV ELIRVARVRAPQLPIFALGEQVTIENAPAESMADLHQLRGILYLFEDTVPFLARQVARAARNYLAGLLPPFFRALVEHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEDRAARNFGADHTFFVINGTS TANKIVWHSMVGREDLVLVDRNCHKSILHSIIMTGAIPLYLTPERNELGIIGPIPLSEFSRESIAAKIAASPLARGREPK VKLAVVTNSTYDGLCYNAELIKQTLGDSVEVLHFDEAWYAYAAFHEFYDGRYGMGTSRSEAGPLVFATHSTHKMLAAFSQ ASMIHVQDGGARQLDVARFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLVQETFDEALSFRRALANARQNLGRGD WWFGVWQPEQVEGTDQVRTGDWVLEPSADWHGFGDIAEDYVLLDPIKVTLTTPGLSAGGKLGEQGIPAAIVSRFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLVTELLEFKRCYDANLPLVDVLPSVAQAGGKRYNGMGLRDLSDALHASYRDNATA KAMKRMYTVLPEVAMRPSEAYDKLVRGEVEAVPIAQLEGRIAAVMLVPYPPGIPLIMPGERFTEATRSILDYLEFARTFE RAFPGFDSDVHGLQHQDGPSGRCYTVECIKE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 1e-134 | 45 |
cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 1e-130 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PSPA7_3478 | YP_001348838.1 | putative Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 6e-135 | 45 |