Gene Information

Name : PSPA7_3179 (PSPA7_3179)
Accession : YP_001348539.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 3290885 - 3292111 bp
Length : 1227 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF01507

DNA sequence :
ATGGCTGGAAAGCACTACCAGGAGGCCGACGTTCATAGCGCAGCCCTTTCCCGCATCCGCCTGGTCTTCGAGCATTTCGA
GCGCGTCTGCGTCGCGTTCTCCGGCGGCAAGGACAGCTCGGTGACCCTGCAACTGGCCCTCGACGTGGCTCGCGAGATGG
GCCGCGGGCCGCTGGACGTGCTGTTCATCGACCTCGAGGGGCAGTACCGGGCGACGATCGAACATGTCAGCGAGATGCTC
GGGCATCCCGACGTGCGCCCCTGGTGGGTGTGCCTGCCGCTCAACCTGCGCAACGCCTCCAGCCTGGAGCAGCCCTACTG
GTGCTGCTGGGAGCCCGAGGCCGAGGCCGACTGGGTACGGCCGCTGCCGCGCCATCCCGGGGTGATCAGCGATCCGTCGT
TCTTTCCCTTCTACCGCTACCGCATGGAGTTCGAGGAATTCGTCGGCGGTTTCAATGCCTGGCTGGCCGGCGAGACGCCC
ACCGCGTTCCTGGTCGGCATCCGCTCGGACGAATCGCTCAACCGCTACCTGGCGGTCAGGCGACGCAGCCGCGCCAAGCA
ATGCGCCTGGACGCCCCCCGGTGGCCCTGCGCCACTGGCATGGAGTGCCCGCGACCGGCTGAACCCCCACGCGGTGAGCT
TCTTTCCGATCTACGACTGGCGCTTCGAGGACCTCTGGCGCTGCGTCGCCGAGCACGGCTATGCCTACAACCGGCTCTAC
GACCAGATGTACCGCGCCGGCGTACCCTTCTCGCAGATGCGTATCTGCCAACCCTATGGCGACGACCAGCGCAAGGGGCT
CGACCTGTTCCAGCGGATCGAGCCGCGAACCTGGGCCCGGGTGGTCCACCGGGTCGCCGGCGCCAACTATGGCGCGCGCT
ACTGTCGCCAGCGCTTCCTCGGCTACCGCGGCGGCCTCGGCCTGCCGCCGACCTTCGCCAGCTGGCGCGAGTACAGCCGG
TTCCTCCTGCGCAGCATGCCGCCGCCCCTGCGGGGCATCTACCTACGTCGGATCGAACGTTTCATCCTGTGGTGGAAGCA
GCACGACTACCCGCTTTCCACCTGGCCCGACGCCGGCGTGCCGGCCCTGGAGAACCGGCGCAAGCAACCGTCCTGGCGGC
GCATCGCGCTGTCGCTGCTGAAGCAGGACATGGCCCGCTCGCTGTCCTTCGGCTATGCCCAGGCCGATGTCGAACGCCTG
CTCGCCGAGCGGAAGAAGCGCACGTGA

Protein sequence :
MAGKHYQEADVHSAALSRIRLVFEHFERVCVAFSGGKDSSVTLQLALDVAREMGRGPLDVLFIDLEGQYRATIEHVSEML
GHPDVRPWWVCLPLNLRNASSLEQPYWCCWEPEAEADWVRPLPRHPGVISDPSFFPFYRYRMEFEEFVGGFNAWLAGETP
TAFLVGIRSDESLNRYLAVRRRSRAKQCAWTPPGGPAPLAWSARDRLNPHAVSFFPIYDWRFEDLWRCVAEHGYAYNRLY
DQMYRAGVPFSQMRICQPYGDDQRKGLDLFQRIEPRTWARVVHRVAGANYGARYCRQRFLGYRGGLGLPPTFASWREYSR
FLLRSMPPPLRGIYLRRIERFILWWKQHDYPLSTWPDAGVPALENRRKQPSWRRIALSLLKQDMARSLSFGYAQADVERL
LAERKKRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 3e-60 42
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-61 41
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 2e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_3179 YP_001348539.1 hypothetical protein VFG1504 Protein 2e-60 42