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Name : PSPA7_3017 (PSPA7_3017) Accession : YP_001348377.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Unknown Product : RcsC Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0642 EC number : - Position : 3111884 - 3115135 bp Length : 3252 bp Strand : + Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518 DNA sequence : GTGAAGTCCGTCCGTATCCTGGAACATGACAACAAGCTGCTGCTCAAGTGGGCGAGCGTCTCGCGGAGCCTGAACATCGG GCTGCTCTGCGTGGCGGTATTGACCGTATTGCTGTTCAGCATCTGCTACTGGTCGTTGGGGCGACTGCTCCAGGAAGAAG AGGACAAGGTTTCCTTCCACTTCACCCGGCTGATCGGCGACATACGGGAACACGAGGCCTTCCTCGTGCGCATCGCACGC AAAAGCGACAAGGCCACGCAGAAGCACGACCATGACGTGGTGCCCCTGCAACGCCGGCTCCTGGCCAGGGAAGAAGGTGT CGAGGTCTATGAGGGGCGGGAATTTTCCTTTGCCATGCCGTTCCTCCTGGCTACTCGCCACGGGGTCGACAGGAATGCGT CGTGGGGGCCGTTCTCCCTGGGCGTCCTGCTCGCCAACTTCTACGGCGGCTTCTGGAGCCTTTCGGCATACCCCGCGCCG CAACTGCTGATCTACGATCTTTCCGGAAGTACCCGCCTGGCCGTGCCGGCGATCCACGCCATGGCGGAACGCGAGAGGCT GCGCGAGAACCAGCCGATGATGGTCGACCGCATGCTGGCGCGCCTGCGCGAAACGCCACCGGGCGCCGCCGACCACCCTG TGCATTGGGTGCGCGCGGACCGCTATCGGGGGCAGGCGCCCGAGCTCCTGGGAATCGTCAGGGTCGATCTGCCGGAAGCC CTGTGGTGGCGGGATGAGCCGAACCACCTGATCGTTGCCGCGAGTCTGCTCGACCTGCGGAGGATCAACGATTTCGAGCA ATTGATGGAGCGTCCGGTGTTCGACTCGTACAGCCTGGTTTCGCCGGAGGGCGATCTGCTGGTGGGCGAGACACCGGCCG AAGGGCTTGGCGACGGCCTGAACTTCACCCGCCACGGGGTGGCGATTCAACTGCGCAGCCAACCCGCAGGCGGCTGGCTC GCGGTCTACCGCATCGGTTACGCCAGTTTCTTTCGCCATGCCCAATGGCTGCTGGCCGGCCTGCTGCTGGTTCCGGCGCT CGTCCTGGGCGGCTGGCTCGGCCTGCGCTGGTACGCGCGCAGCGTCGTCCATCCCGCGCATCGGGCGCACCAGCAACTCG TCGAGAGCGACACGTTCAGCCGGACCCTGATCCAGACCGCGCCGGTGGCGCTGGTGGTACTCAGCCAGGATGGTCGGCAA CTGGTGACCTGCAACCAGCTGGCCGGCCAGTGGCTGGGCGGGGCCGCGGAGATCCTCGCCCTGACGTCCCGCTGGAAACT GCTCGACGCCCAGGGGCAGGTGGCGGGAGGCATCTGTGTGCAGGTCGGCGGGCGCTACCTGCAGGCGGCTTTCGCCGCGA CCCGCTATGCCGGCACGGAGGCGGTGCTGTGCGTGTTCAACGACATTACCGTGCATTGCGAGGCGGAGGCGGCGCTGGCC AGCGCCAAGCGGGCGGCTGACGCTGCCAGCCAGGCCAAGACGTTGTTCCTGGCCAGCATGAGCCATGAGATCCGTACCCC CCTGTACGGTGTCCTCGGCACCCTCGAACTGCTCGATCTCACCGAGCTGAACGAGAGGCAGCGCGCGTATCTGCGGACCA TCCAGGGCGCCTCCGGGACGCTCATGCAACTGATCAGCGATGTACTGGACGTCTCGAAGATCGAGGCGGGGCAGATGGCC CTGGCGCCTGTCGTCTTCGATCCACTGGAACTCACGCAGGAAGTGCTTGGCAGCTTCTCCGCCAGCGCCATGGCCAAGGG GTTGCAATTCTATGCCTGCATCGACCCCGACGTACCCGCGCAGTTGATCGGCGACGTGGCGCGGATCCGCCAGGTCCTCG CCAACCTGGTGAGCAACGCAGTGAAGTTCACCGATATCGGTCGTGTGGTCCTGCGCCTGAAATTGCTGTCACGGGAGGAG GGTCGGGCCGCCTTGCAGTGGCAGGTTGCCGATACCGGCATCGGTATCGCGATCGAACAGCAGAAACGCTTGTTCGAGGC TTTCTATCAGGTGCCCGGGGTGCCCCATGCCGGCGGCACGGGGCTGGGCCTGTCGATCTGCTGGCATCTCGCGGAGATGA TGGGTGGCACGCTGCGTGTCGTCAGCGAAGCGGGGCTGGGCAGCAGCTTCAGCCTGGTGCTGGATCTGCCCGAGACCGAA CCGGAGGGACTGGCCCGCCAACCGGAACGCTGGCTGCAGGGAGCTGTCCTGGTGCGTTCGCCGGTGCGCGAACTGGCCGA CAGCCTGAGCGGCTGGCTGGCACGCTGGGGCTGTACCGTGCCCGGCGGCGCGTCCTGCCCCGCGGAGCCCGGCCAGACGG TGCTGCTGGATCTGCTGCCGGCGCCGAACGCGACCGTATGCTGGTCCGGGCCGCGGGTCTGCGCCTCGCCGGCGGCGCCG AGCCAGCCGGAACTCCGTGAAGACGGCTGGCATGTCAGCCTGCACGATCTGGCGGGCATCGGCCGGGCCGTGGCCCTGGC CCTGGGGAAGGAGATACCGCAGGCGGTGGCGCCAGACCCCGCGCTGCGCTCGCGGAAGCTCGAACTGCGGGTACTGGTCG CCGAGGACAACCCGGTCAACCAGGCGCTGCTTCGCGAGCAGCTCGAGGAACTGGGCTGCCACGTGAGTCTGGCCAGCGAT GGGCGGCAGGCGCTGCAACTGTTCGACCACCAGCGCTTCGACCTGCTGCTCAGCGACGTCAACATGCCGAACATGACCGG CTACGAACTGACCCAGGCCCTGCGCGAACGCGGAGAAACCCTGCCGATCATCGGTGTCACCGCCAACGCCCTGCGCGAAG AAGGCGAGCGCTGCCGGGCGGTGGGCATGAACGCCTGGCTGGTGAAGCCGATCACCCTGCATACGCTGCACGAACAGCTC GGCGCGTTCGGCGCTGGGGGCATGTCGCCAGCCGCCGACGCGCAAGCGAGCGCCAGGCCAGACCAAGCCTGCGACGAGGG TCTGGCGCCGCGGGTGCCTGAACGCATGCGTGGGCTTTTCCTGGCGACCATGAGCAAGGATCTGGACGCGGCCCGGGAGG CGCTCCGCCGGGGCGACCCGGAAGGGTTGCGGCAGGGGCTGCATCGCATGGCCGGCTCCCTGGCGGTCACCCGTGCGCGG GCGCTGGTCGCGCTGTGCCAGCGGGTGGAGGAGGGCCTGGTGGAAGGAACGCTCGACTGCGCCGCCGGAGAGGTCGCCGA AGTGCTCGCCCATCTCGCGCGGGCGCTGGAACAGGTGAGACGGACCGGCTGA Protein sequence : MKSVRILEHDNKLLLKWASVSRSLNIGLLCVAVLTVLLFSICYWSLGRLLQEEEDKVSFHFTRLIGDIREHEAFLVRIAR KSDKATQKHDHDVVPLQRRLLAREEGVEVYEGREFSFAMPFLLATRHGVDRNASWGPFSLGVLLANFYGGFWSLSAYPAP QLLIYDLSGSTRLAVPAIHAMAERERLRENQPMMVDRMLARLRETPPGAADHPVHWVRADRYRGQAPELLGIVRVDLPEA LWWRDEPNHLIVAASLLDLRRINDFEQLMERPVFDSYSLVSPEGDLLVGETPAEGLGDGLNFTRHGVAIQLRSQPAGGWL AVYRIGYASFFRHAQWLLAGLLLVPALVLGGWLGLRWYARSVVHPAHRAHQQLVESDTFSRTLIQTAPVALVVLSQDGRQ LVTCNQLAGQWLGGAAEILALTSRWKLLDAQGQVAGGICVQVGGRYLQAAFAATRYAGTEAVLCVFNDITVHCEAEAALA SAKRAADAASQAKTLFLASMSHEIRTPLYGVLGTLELLDLTELNERQRAYLRTIQGASGTLMQLISDVLDVSKIEAGQMA LAPVVFDPLELTQEVLGSFSASAMAKGLQFYACIDPDVPAQLIGDVARIRQVLANLVSNAVKFTDIGRVVLRLKLLSREE GRAALQWQVADTGIGIAIEQQKRLFEAFYQVPGVPHAGGTGLGLSICWHLAEMMGGTLRVVSEAGLGSSFSLVLDLPETE PEGLARQPERWLQGAVLVRSPVRELADSLSGWLARWGCTVPGGASCPAEPGQTVLLDLLPAPNATVCWSGPRVCASPAAP SQPELREDGWHVSLHDLAGIGRAVALALGKEIPQAVAPDPALRSRKLELRVLVAEDNPVNQALLREQLEELGCHVSLASD GRQALQLFDHQRFDLLLSDVNMPNMTGYELTQALRERGETLPIIGVTANALREEGERCRAVGMNAWLVKPITLHTLHEQL GAFGAGGMSPAADAQASARPDQACDEGLAPRVPERMRGLFLATMSKDLDAAREALRRGDPEGLRQGLHRMAGSLAVTRAR ALVALCQRVEEGLVEGTLDCAAGEVAEVLAHLARALEQVRRTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rcsC | AAP84165.1 | RcsC | Not tested | PAPI-1 | Protein | 0.0 | 75 |
