Gene Information

Name : PSPA7_2834 (PSPA7_2834)
Accession : YP_001348194.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2887238 - 2888065 bp
Length : 828 bp
Strand : -
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00665

DNA sequence : 
GTGGAAGTGGTCTGTTCAGCTTTCGATGTGGCGCGGTCTTGCTACTACGTCCACCGTCTTCGACGGCGGCGTGTCGATGC
TCGCCGCGTGGCGCTACGCAGCCAGGTCAACCAGTTGTTCAGCCAGAGTCGGGGCTCGGCCGGCAGCCGCAGCATTCTGG
GCATGCTGCGCGAAGAGGGCGTGACCATCGGCCGTTTCCGAGTGCGTCGGTTGATGCGTGAGCTGGGCCTGGTTAGCAAG
CAACCGGGCTCGCACGCCTACAAACAGGCCACGGTTGAGCGGCCGGATATCCCGAATCGGCTGAACCGCGAATTCGCGAC
CGAGCATCCCAATCAGGTGTGGTGTGGCGACATCACCTACGTCTGGGCGCAAGGCCGTTGGCACTACCTGGCCGCGGTGC
TGGATCTGCATACCCGGCGGGTGATCGGTTGGGCGTTCTCGGCCAAGCCGGATGCCGAGCTGGTGATCAAGGCCCTGGGC
ATGGCCTACGAACAGCGCGGCAGGCCACAGCAGGTGCTGTTCCATTCAGACCAGGGCAGCCAGTACGCCAGCCGCCTGTT
TCGGCAACGGCTCTGGCGCTATCGGATGCAGCAGAGCATGAGCCGTCGGGGGAATTGCTGGGATAACTCGCCGATGGAGC
GCCTGTTCCGCAGTCTGAAGTCGGAGTGGGTCCCGTCAACGGGTTACCTGACGGCGCAGGAGGCCCAACGGGACATCAGT
CATTACCTGATGCACCGCTACAACTGGATCAGGCCGCATCAATTCAACGACGGGCTACCGCCTGCGGTGGCCGAAGAAAA
ACTCAACCCACTGTCCGGGATGGGTTGA

Protein sequence : 
MEVVCSAFDVARSCYYVHRLRRRRVDARRVALRSQVNQLFSQSRGSAGSRSILGMLREEGVTIGRFRVRRLMRELGLVSK
QPGSHAYKQATVERPDIPNRLNREFATEHPNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALG
MAYEQRGRPQQVLFHSDQGSQYASRLFRQRLWRYRMQQSMSRRGNCWDNSPMERLFRSLKSEWVPSTGYLTAQEAQRDIS
HYLMHRYNWIRPHQFNDGLPPAVAEEKLNPLSGMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 1e-114 98
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 7e-59 57
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 7e-59 57
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-61 57
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 9e-62 57
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-59 57
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 4e-59 57
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-61 56
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-61 56
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-65 56
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-65 51
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-65 51
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-65 51
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-65 51
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-65 51
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-65 51
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-65 51
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-65 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_2834 YP_001348194.1 hypothetical protein VFG0785 Protein 5e-62 57
PSPA7_2834 YP_001348194.1 hypothetical protein VFG1484 Protein 4e-59 57
PSPA7_2834 YP_001348194.1 hypothetical protein VFG1122 Protein 6e-66 51