Gene Information

Name : gacA (PSPA7_2613)
Accession : YP_001347976.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : response regulator GacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2632765 - 2633409 bp
Length : 645 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence : 
GTGATTAAGGTGCTGGTGGTCGACGACCACGATCTGGTACGCACCGGTATTACCCGCATGCTGGCCGACATCGAAGGCTT
GCAAGTGGTCGGCCAGGCCGACTGCGGTGAGGACTGTCTGAAACTGGCGCGCGAGCTGAAGCCGGACGTGGTCCTGATGG
ACGTCAAGATGCCCGGCATCGGCGGTCTGGAAGCGACCCGCAAGCTGCTGCGCAGCCAGCCCGACATCAAGGTCGTGGTG
GTCACCGTCTGCGAGGAGGATCCGTTCCCCACTCGCCTCATGCAGGCCGGCGCCGCCGGCTACATGACCAAGGGCGCGGG
GCTGGAGGAGATGGTCCAGGCGATCCGCCAGGTGTTCGCCGGCCAGCGCTACATCAGCCCGCAGATCGCCCAGCAGCTGG
CGCTGAAATCCTTCCAGCCGCAGCAGCACGATTCCCCCTTCGATTCGCTGTCCGAGCGCGAGATCCAGATCGCCCTGATG
ATCGCCAATTGCCACAAGGTGCAGAGCATCTCCGACAAGCTGTGCCTGTCGCCGAAGACGGTGAATACCTACCGCTACCG
TATCTTCGAGAAGCTCTCGATCACCAGCGATGTGGAACTGGCGTTGCTCGCCGTCCGTCATGGCATGGTCGACGCCGCCA
GCTAG

Protein sequence : 
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVV
VTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALM
IANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 9e-59 57
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 9e-59 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_001347976.1 response regulator GacA VFG1889 Protein 5e-56 54