Gene Information

Name : PSPA7_2543 (PSPA7_2543)
Accession : YP_001347907.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Resistance
Product : putative two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2559032 - 2559703 bp
Length : 672 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGCGGTTGCTGCTGGTTGAGGATCACGTTCCGCTGGCCGACGAACTGCTGGCCAGCCTGGGCCGCCAGGGTTACGCGGT
GGACTGGCTGGCCGACGGCCGCGACGCGGCGCTGCAGGGCGCCAGCGAACCCTACGACCTGATCATCCTCGACCTCGGCC
TGCCTGGCCGCCCCGGCCTGGAGATCCTCCGGGAATGGCGCGGCCTGGGCCTCGCCACCCCGGTGCTGATCCTCACCGCG
CGCGGTTCCTGGGCCGAGCGCATCGACGGGCTCAAGGCCGGCGCCGACGACTACCTGACCAAGCCGTTCCATCCGGAAGA
ACTGGCCCTGCGCATCCAGGCCCTGTTGCGCCGCGCCCACGGCCTGGCCAACCAGAGCCAGCTGGAGGCCGCCGGGCTCA
GCCTCGACGAGCAGCGCCAGTGCGTGTGCCTGAACGGTGCCGACGTCGACCTGACCGCCGCCGAATTCCGCCTGCTGCGC
TATTTCATGCTGCACCCCGGCCAGGTCCTGTCCAAGGGACACCTGGCCGAGCATCTGTACGATGGCGAGACCGAACGCGA
TTCCAACGTCATCGAGGTCCACGTCAACCACCTGCGGCGCAAGCTCGGTCGCGAGGTGATCGAGACCCGCCGTGGGCAGG
GCTACCGCTACGCCGGGGTGGCCGGCGGATGA

Protein sequence :
MRLLLVEDHVPLADELLASLGRQGYAVDWLADGRDAALQGASEPYDLIILDLGLPGRPGLEILREWRGLGLATPVLILTA
RGSWAERIDGLKAGADDYLTKPFHPEELALRIQALLRRAHGLANQSQLEAAGLSLDEQRQCVCLNGADVDLTAAEFRLLR
YFMLHPGQVLSKGHLAEHLYDGETERDSNVIEVHVNHLRRKLGREVIETRRGQGYRYAGVAGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_2543 YP_001347907.1 putative two-component response regulator NC_002516.2.879194.p Protein 3e-37 48
PSPA7_2543 YP_001347907.1 putative two-component response regulator BAC0487 Protein 5e-27 42
PSPA7_2543 YP_001347907.1 putative two-component response regulator CP000647.1.gene1136. Protein 6e-29 41
PSPA7_2543 YP_001347907.1 putative two-component response regulator CP001918.1.gene2526. Protein 2e-28 41
PSPA7_2543 YP_001347907.1 putative two-component response regulator CP004022.1.gene1005. Protein 2e-31 41
PSPA7_2543 YP_001347907.1 putative two-component response regulator BAC0638 Protein 4e-23 41
PSPA7_2543 YP_001347907.1 putative two-component response regulator BAC0530 Protein 6e-29 41