Gene Information

Name : kdsB (PSPA7_2182)
Accession : YP_001347554.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2236732 - 2237496 bp
Length : 765 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGACCCAGGCGTTCACTGTCGTCATTCCCGCCCGTTACGCCTCCACCCGCCTGCCTGGCAAGCCGCTGCAGGACATCGC
CGGCCAGCCGATGATCCAGCGCGTCTGGAACCAGGCGCGCAAGAGCGCCGCCAGCCGCGTGGTCATCGCCACCGACGACG
AGCGCATCCTGGCCGCCTGCCAGGGCTTCGGCGCCGAGGTCCTGCTGACCCGCGCGGATCACAACTCCGGTACCGATCGC
CTGGAGGAAGTCGCTTCCCGGCTCGGCCTGGCGGCCGATGCCATCGTGGTCAACGTGCAGGGCGACGAGCCGCTGATCCC
GCCGGCGCTCATCGACCAGGTGGCGGCCAACCTGGCGGCGCATCCGGAGTCGGCCATCGCCACCCTGGCCGAGCCGATCC
ATGACGTCGCCGCGCTGTTCAACCCGAACGTGGTCAAGGTCGCCACCGACGTCAACGGCCTGGCCCTGACCTTCAGCCGC
GCGCCCTTGCCCTGGGCGCGCGACGCCTTCGCCGGGGATCGCGACAGCCTGCCGGACGGTGTGCCCTACCGCCGCCACAT
CGGGATCTACGCCTACCGCGTCGGCTTCCTCGCCGACTTCGTCGCCTGGGGGCCGTGCTGGCTGGAGAATACCGAGAGCC
TCGAGCAACTGCGCGCGCTCTGGCACGGGGTGCGCATCCATGTGGCCGATGCCCGCGAAACCATGCTGCCGGGCGTGGAT
ACGCCGGAAGACCTCGAACGCGTCCGCCGCGTACTGGGGGGTTGA

Protein sequence : 
MTQAFTVVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKSAASRVVIATDDERILAACQGFGAEVLLTRADHNSGTDR
LEEVASRLGLAADAIVVNVQGDEPLIPPALIDQVAANLAAHPESAIATLAEPIHDVAALFNPNVVKVATDVNGLALTFSR
APLPWARDAFAGDRDSLPDGVPYRRHIGIYAYRVGFLADFVAWGPCWLENTESLEQLRALWHGVRIHVADARETMLPGVD
TPEDLERVRRVLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-38 43
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-38 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-37 42