|
Name : gspF2 (PSPA7_2031) Accession : YP_001347407.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2071901 - 2073118 bp Length : 1218 bp Strand : + Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120 DNA sequence : ATGGCCGCTTTCGAATACCTCGCCCTCGACCCCGGCGGTCGCCAGCAGAAGGGCGTGCTGGAGGCGGACAGCGCGCGCCA GGTCCGCCAGCTGCTGCGCGAACGCCAACTGGCGCCGCTCGAGGTGAAACCCACGCGTACCCGCGAGCAGGGCGGGCAGG GCGGACGCCTGAGCTTCGCCCGCGGGCTGTCGGCGCGCGACCTGGCGCTGGTGACCCGGCAACTGGCGACCCTGGTCCAG GCCGCGCTGCCGATCGAGGAAGCGTTGCGCGCCGCCGCCGCGCAATCCACCTCGCAGCGCATCCAGTCGATGCTCCTCGC GGTGCGCGCCAAGGTCCTCGAGGGGCATAGCCTGGCCGGCAGCCTGCGCGAGTTCCCCTCGGCCTTCCCCGAACTGTATC GCGCCACGGTGGCTGCCGGCGAGCACGCCGGGCACCTCGGCCCGGTGCTGGAGCAGCTCGCCGACTACACCGAGCAACGC CAGCAGTCGCGGCAGAAGATCCAGCTGGCGCTGCTCTATCCGGTGATCCTGATGGTCGCCTCACTGGCCATCGTCGGTTT CCTGCTGGGCTACGTGGTGCCCGACGTGGTCCGCGTGTTCATCGATAGCGGGCAGACCCTGCCGCTGCTGACCCGCGTGC TGATCGGCGTCAGCGACTGGGTCAAGGCCTGGGGCGCGCTGGCCTTCGTCGCGGCGATCGGCGGGGTGATCGGCTTCCGC TATGCGCTGCGCAAGGACGCCTTTCGCGAGCGCTGGCATGGCTTCCTGTTGCGCGTGCCGCTGGTCGGACGGCTGGTGCG CTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATCCTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGA TCGCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAGGTGGTCAAGGCGGCGCAGAAAGTCCGCGAGGGCGCCAGC CTGACCCGCTCGCTGGAGGCCACCGGGCAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGTTCCGGCGA GCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAACGACCTGGCCGCGCAGATCGGCCTGATGGTCGGCCTGT TCGAGCCGTTCATGCTGATATTCATGGGCGCGGTGGTGCTGGTCATCGTCCTTGCCATTCTTCTTCCGATCCTTTCTCTC AACCAACTCGTGGGGTAA Protein sequence : MAAFEYLALDPGGRQQKGVLEADSARQVRQLLRERQLAPLEVKPTRTREQGGQGGRLSFARGLSARDLALVTRQLATLVQ AALPIEEALRAAAAQSTSQRIQSMLLAVRAKVLEGHSLAGSLREFPSAFPELYRATVAAGEHAGHLGPVLEQLADYTEQR QQSRQKIQLALLYPVILMVASLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVSDWVKAWGALAFVAAIGGVIGFR YALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFASTLAILTRSGVPLVEALAIAAEVIANRIIRNEVVKAAQKVREGAS LTRSLEATGQFPPMMLHMIASGERSGELDQMLARTARNQENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLAILLPILSL NQLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 7e-55 | 46 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-55 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF2 | YP_001347407.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-151 | 99 |
| gspF2 | YP_001347407.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-53 | 45 |
| gspF2 | YP_001347407.1 | general secretion pathway protein F | VFG1870 | Protein | 9e-65 | 43 |
