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Name : PSPA7_1986 (PSPA7_1986) Accession : YP_001347367.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase WbpM Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2026615 - 2028627 bp Length : 2013 bp Strand : + Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 DNA sequence : TTGAGGGAGTATGGAATGCTAGATCGCTTTAGAGTAAAACTGTTGTCGATGCCTCGTCGGTGGAAGCGTTTGCTTCAAGT GGCAACAGATATCCTGTTGGTGTGGTTATCGCTGTGGTTGGCATTTGTCGTGCGTCTTGGCACGGACGACATGATTGATA TTTTCGGCGAGCATGCCTGGCTCTTCATTGCCGCTCCGCTCATCGCCATCCCACTGTTCATTCGCTTCGGCATGTATCGC GCGGTAATGCGCTATCTCGGTAACGATGCATTGATCGCCATCGCCAAGGCGGTGACCATCTCGGCTCTGGTGCTGTCGCT GGTAGTGTACTGGTATCGTGGCGCGCCGGCGCCGGTGCCACGTTCCCTGGTGTTCAACTACTGGTGGTTGAGCATGCTGC TGATCGGCGGCTTGCGTCTGGCCATGCGCCAGTATTTCATGGGCGACTGGTACTCTGCTGTGCAGTCGGTACCATTTCTC AATCGCCAGGACGGTCTGCCCAGGGTGGCCATCTATGGTGCGGGGGCGGCCGGCAACCAGTTGGTTGCGGCACTGCGTCT CGGTCGGGCGATGCGTCCGGTGGCGTTCATCGATGACGACAAGCAGATCGCCAACCGGGTCATTGCCGGCCTGCGGGTCT ATACCGCCAAGCATATCCGCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCCATTCCGTCCGCCACCCGG GCCCGGCGCCGAGAGATTCTCGAGTCCCTGGAGCCGTTCCCGCTCCACGTGCGCAGCATGCCCGGCTTCATGGACCTGGC CAGCGGCCGGGTCAAGGTGGACGACCTGCAGGAGGTGGACATCGCCGATCTGCTCGGGCGCGACAGCGTGGCGCCGCGCA AGGAGCTGCTCGAGCGTTGCATCCGTGGCCAGGTGGTGATGGTGACCGGGGCGGGCGGTTCGATCGGTTCCGAACTCTGC CGGCAGATCCTGAGTTGCTCGCCCAGCGTGCTGATCCTGTTCGAGCACAGCGAATACAATCTTTACAGCATCCATCAGGA ACTGGAGCGTCGGGTCAAGCGCGAGTCGCTTTCGGTGAACCTGTTGCCGATCCTCGGCTCGGTGCGCAATCCAGAGCGCC TGGTCGACGTGATGCGCACCTGGAAGGTCAACACCGTCTATCACGCCGCAGCCTACAAGCATGTACCCATCGTCGAGCAC AACATTGCCGAGGGGGTCCTCAACAATGTGATGGGCACCCTGCATGCGGTGCAGGCGGCGGTGCAGGTCGGCGTGCAGCA CTTCGTGCTGATCTCCACCGACAAGGCGGTGCGACCGACCAATGTGATGGGTAGCACCAAACGCCTGGCGGAGATGGTGC TGCAGGCGCTCAGCAACGAGTCGGCACCGGTCCTTTTCGGCGACCAGAAGGGTGTGCACCAGGTCAACAAGACCCGTTTC ACCATGGTCCGCTTCGGCAACGTCCTCGGCTCGTCGGGCTCGGTCATCCCGCTGTTCCGCGAGCAGATCAAGCGTGGCGG ACCGGTGACGGTCACCCACCCGAGCATCACCCGTTACTTCATGACCATTCCCGAGGCGGCCCAGCTGGTCATCCAGGCCG GCTCGATGGGGCAGGGCGGGGATGTGTTCGTGCTGGACATGGGGCCACCGGTGAAGATTCTGGAGCTTGCCGAGAAAATG GTTCACCTGTCCGGGCTGAGCGTGCGTTCCGAGCGCTCGCCGCATGGCGACATCGCCATCGAGTTCAGTGGCTTGCGTCC GGGCGAGAAGCTCTACGAAGAACTGTTGATCGGCGATAACGTCAACCCTACCGACCACCCGATGATCATGCGCGCCAACG AGGAGCATCTGTCCTGGGAAGCGTTCAAGGGGGTGCTGGAGCAATTGCTGACGGCCGTTGGGACGGACGATTATTCGAGA GTCCGCCAACTGCTGCGGGAAACCGTCAGCGGTTATACGCCCGACGGCGAAATCGTCGACTGGATCTATCGCCAGAGACG GCGCGAACCCTGA Protein sequence : MREYGMLDRFRVKLLSMPRRWKRLLQVATDILLVWLSLWLAFVVRLGTDDMIDIFGEHAWLFIAAPLIAIPLFIRFGMYR AVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFL NRQDGLPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQEVLLAIPSATR ARRREILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGAGGSIGSELC RQILSCSPSVLILFEHSEYNLYSIHQELERRVKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPIVEH NIAEGVLNNVMGTLHAVQAAVQVGVQHFVLISTDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDQKGVHQVNKTRF TMVRFGNVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPVKILELAEKM VHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKGVLEQLLTAVGTDDYSR VRQLLRETVSGYTPDGEIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-84 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPA7_1986 | YP_001347367.1 | nucleotide sugar epimerase/dehydratase WbpM | VFG0029 | Protein | 4e-118 | 46 |
