Gene Information

Name : rdgC (PSPA7_1858)
Accession : YP_001347241.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1899150 - 1900070 bp
Length : 921 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTCCGCAATCTGCTCGTCTACCGCCTCACCCAGGATCTGCAGCTGGATGCCGACGCCCTCGAGAAAGCCCTCGG
CGAAAAACCCGCCCGTCCCTGCGCCAGCCAGGAGCTGACCACCTACGGCTTCACCGCGCCGTTCGGCAAAGGTCCGGACG
CGCCGCTGGTGCACGTCAGCCAGGACTTCTTCCTGGTCTCCGCACGCAAGGAGGAACGCATCCTGCCGGGCAGCGTCGTG
CGTGACGCGCTGAAGGAAAAGGTCGACGAGATCGAAGCCCAGCAGATGCGCAAGGTCTACAAGAAGGAACGCGACCAGTT
GAAGGACGAGATCGTCCAGACCCTGCTGCCGCGCGCCTTCATCCGCCGCTCCAGCACCTTCGCCGCGATCGCGCCGAGCC
TCGGCCTGATCCTGGTCGACTCGGCCAGCGCGAAGAAGGCCGAAGACCTGCTCTCGACCCTCCGTGAAGCCCTCGGCTCC
CTGCCGGTACGCCCGCTGAGCGTGAAGGTGGCGCCGACCGCCACCCTCACCGACTGGGTCAAGACCCAGGAAGCCGCCGG
TGATTTCCACGTCCTCGACGAGTGCGAACTGCGTGACACCCACGAGGACGGCGGTGTGGTCCGCTGCAAGCGCCAGGACC
TCACCAGCGAGGAAATCCAGCTGCACCTCACCGCCGGCAAGCTGGTCACCCAGCTGTCCCTGGCCTGGTCGGACAAGCTG
TCCTTCGTCCTCGACGACAAGCTGGCGGTCAAGCGCCTGCGTTTCGAGGACCTGCTGCAGGAACAGGCGGAAAAGGACGG
CGGCGAAGACGCCCTCGGCCAACTCGACGCCAGCTTCACCCTGATGATGCTGACCTTCGCCGAATTCCTCCCGGCGCTCT
TCGAAGCCCTCGGCGGCGAAGAGATTCCCCAGGGCGTCTGA

Protein sequence :
MWFRNLLVYRLTQDLQLDADALEKALGEKPARPCASQELTTYGFTAPFGKGPDAPLVHVSQDFFLVSARKEERILPGSVV
RDALKEKVDEIEAQQMRKVYKKERDQLKDEIVQTLLPRAFIRRSSTFAAIAPSLGLILVDSASAKKAEDLLSTLREALGS
LPVRPLSVKVAPTATLTDWVKTQEAAGDFHVLDECELRDTHEDGGVVRCKRQDLTSEEIQLHLTAGKLVTQLSLAWSDKL
SFVLDDKLAVKRLRFEDLLQEQAEKDGGEDALGQLDASFTLMMLTFAEFLPALFEALGGEEIPQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-52 42