Gene Information

Name : PSPA7_0156 (PSPA7_0156)
Accession : YP_001345552.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 171458 - 172954 bp
Length : 1497 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355

DNA sequence :
ATGGCCGAATTGAGCACCGAGAACCTGGCCCAGGGCCAGACCACCACCGAGCAGACCAGCGAGTTCGCCAGCCTGCTGCT
GCAGGAATTCAAGCCCAAGACCGAGCGCGCCCGCGAGGCGGTGGAAACCGCCGTGCGTACCCTCGCCGAACACGCCCTGG
AGCAGACCAGCCTGATCTCCAACGACGCGATCAAGTCGATCGAGTCGATCATCGCGGCGATCGACGCCAAGCTCACCGCG
CAGGTCAACCTGATCATGCACCACGCCGACTTCCAGCAGCTGGAAAGCGCCTGGCGCGGCCTGCACTACCTGGTCAACAA
CACCGAGACCGACGAGCAACTGAAGATCCGTGTGCTGAACATCTCCAAGCCGGAGCTGCACAAGACCCTGAAGAAGTTCA
AGGGCACCACCTGGGACCAGAGCCCGATCTTCAAGAAGCTCTACGAGGAGGAATACGGCCAGTTCGGCGGCGAGCCCTAC
GGCTGCCTGGTCGGCGACTACTATTTCGACCAGTCGCCGCCGGACGTCGAGCTGCTCGGCGAGATGGCGAAGATCTCCGC
CGCGATGCACGCGCCGTTCATCTCCGCCGCCTCGCCGACGGTGATGGGCATGGGTTCCTGGCAGGAACTGTCCAACCCGC
GCGACCTGACCAAGATCTTCACCACCCCGGAATACGCCGGCTGGCGCTCGCTGCGCGAGTCCGAGGACTCCCGCTACATC
GGCCTGACCATGCCGCGCTTCCTGGCGCGCCTGCCGTACGGGGCGAAGACCGACCCGGTGGAAGAGTTCGCCTTCGAGGA
AGAGACCGACGGCGCCGACAGCAGCAAGTACGCCTGGGCCAACTCGGCCTACGCCATGGCGGTCAACATCAACCGTTCCT
TCAAGCTCTACGGCTGGTGTTCGCGGATCCGCGGCGTCGAGTCCGGGGGCGAGGTGCAGGGCCTGCCGGCGCACACCTTC
CCCACCGACGACGGCGGCGTGGACATGAAATGCCCGACCGAGATCGCCATTTCCGACCGTCGCGAGGCGGAGCTGGCGAA
GAACGGCTTCATGCCGCTGCTGCACAAGAAGAACACCGACTTCGCCGCCTTCATCGGCGCGCAGTCGCTGCAGAAACCCG
CCGAGTACGACGATCCGGACGCCAGCGCCAACGCCAACCTGGCGGCGCGCCTGCCCTACCTGTTCGCCACCTGCCGCTTC
GCCCACTACCTGAAGTGCATCGTTCGCGACAAGATCGGCTCGTTCAAGGAGAAGGACGAGATGCAGCGCTGGCTGCAGGA
CTGGATCCTCAACTATGTCGACGGCGACCCGGCTCACTCCACCGAGACCACCAAGGCCCAGCACCCGCTGGCGGCGGCCG
AGGTGGTGGTGGAGGAAGTCGAAGGCAACCCGGGTTACTACAACTCGAAGTTCTTCCTTCGCCCGCACTACCAGCTCGAG
GGACTGACTGTATCGCTACGCCTGGTATCCAAGCTGCCTTCGGCCAAAGAGGCCTGA

Protein sequence :
MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAAIDAKLTA
QVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPY
GCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTF
PTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDASANANLAARLPYLFATCRF
AHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLE
GLTVSLRLVSKLPSAKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-79 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 9e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_0156 YP_001345552.1 hypothetical protein VFG2070 Protein 0.0 99
PSPA7_0156 YP_001345552.1 hypothetical protein VFG2093 Protein 4e-84 43
PSPA7_0156 YP_001345552.1 hypothetical protein VFG2475 Protein 1e-83 43