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Name : gspF3 (PSPA7_1414) Accession : YP_001346798.1 Strain : Pseudomonas aeruginosa PA7 Genome accession: NC_009656 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1428931 - 1430148 bp Length : 1218 bp Strand : - Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120 DNA sequence : ATGGCTGCCTATGAATACCTCGCCATGTGCAACGCCGGACGCCGCAGCCGCGGCGTGCAGGAAGCCGACAGCCTGCGCCA GGCGCGCCAGCTGCTGCGCGAACGCAACCTGGTCCCCCTGCAGGTCAGGCCGGCGCGGGGCAGCCGGGCTCCGGACCAGG CCGCGGGAGCACCCTCCAGCCGCGCCCTCGGCGCCGCCGAGCTGGCCCTGCTTACCCGCCAGCTGGCCACCCTGGTACAG GCCGCCCTGCCCCTGGAGGAAGTCCTCTCGGCGGTCGCCGCGCAATGCGAGAAGCGCAGCCGGCAGGGCATGCTCCTGGC GATCCGCTCGCGGGTCCTCGAAGGACACGGCCTGGCCCGCGCCATGGGCGAGTTCCCCCGCGCCTTCCCGGCGCTGTACC GGGCCACCGTGGCCGCCGGCGAACGCGCCGGCCACCTCGGCCAGGTGCTCATGCAACTGGCCGACTACACCGAGGCGCGC CAGGCCGCGCGCCAGCAGATCCAGCTGGCGATGCTGTACCCGGGCATCCTCCTGCTGGCGGCCTTCGGCATCGTCGGCTT CCTGCTCGGTTTCGTGGTACCGGACGTGGTCAAGGTGTTCATCGACAGCGGCCAGGAGCTGCCGGTCCTGACCCGCGGGC TGATCGCCCTGAGCAACCTGCTGCGCGACTACGGGATGCTCCTGCTGGTGATCGGCGGCGGCCTCTCCGGGGCCGCCCGA ATGGCCCTGCGCAAGCCCGCCGCGCGCCTGCGCTGGCACCGTCTCCAGTTGCGCCTGCCATTGCTCGGACGGGTGATCCG CGCCAGCAACTGCACCCGCTTCGTCAGCACCCTGGCGATCCTCGGGCGCAGCGGCGTGCCGCTGGTGGACGCGCTGGAGA TCGCCGCCGAGGTGGTCGCCAACCAGCAGATTCGGACCGGTCTGAAAGACGTCGCCCGCTCCGTGCGCGAAGGTGGCGGC CTGACCCGGGCGCTGGAACGGAGCGGGCATTTCCCGCCGATGATGCTCTACATGATCGCCAGCGGCGAACGCTCCGGCGA GCTGGACGCCATGCTCGACCGCGCCGCGCGCCAGCAGGAAGCCCAGCTGGCGAACCGCATCGCCATGCTGGTCGGCCTGT TCGAGCCGGCGATGCTGGTGTTCATGGGCGCCAGCGTACTGCTCATCGTGCTGGCGATCCTGATGCCCATCCTCAGCCTC AACCAACTCATCACCTGA Protein sequence : MAAYEYLAMCNAGRRSRGVQEADSLRQARQLLRERNLVPLQVRPARGSRAPDQAAGAPSSRALGAAELALLTRQLATLVQ AALPLEEVLSAVAAQCEKRSRQGMLLAIRSRVLEGHGLARAMGEFPRAFPALYRATVAAGERAGHLGQVLMQLADYTEAR QAARQQIQLAMLYPGILLLAAFGIVGFLLGFVVPDVVKVFIDSGQELPVLTRGLIALSNLLRDYGMLLLVIGGGLSGAAR MALRKPAARLRWHRLQLRLPLLGRVIRASNCTRFVSTLAILGRSGVPLVDALEIAAEVVANQQIRTGLKDVARSVREGGG LTRALERSGHFPPMMLYMIASGERSGELDAMLDRAARQQEAQLANRIAMLVGLFEPAMLVFMGASVLLIVLAILMPILSL NQLIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-72 | 47 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-72 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF3 | YP_001346798.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-116 | 64 |
| gspF3 | YP_001346798.1 | general secretion pathway protein F | VFG2049 | Protein | 4e-69 | 46 |
| gspF3 | YP_001346798.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-78 | 43 |
