Gene Information

Name : PSPA7_1028 (PSPA7_1028)
Accession : YP_001346414.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1030822 - 1032309 bp
Length : 1488 bp
Strand : +
Note : Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00171

DNA sequence :
ATGAGTATTGCCATCGACCCGTCCGTCACCGCGTTCCTGCGTAGCCACCATGGGCTGCTGATCGACGGTGAGTCCAGGCC
GGCGCGCTCCGGCGCCGACATGCCGCTGTACGACCCCGCCAGCGGCGCCGAGCTGGCCCGGGTGGCGCGCGCCGCTGCCG
ACGACGTCGACCTGGCGGTCGCCGCGGCGCGGCGTGCCTTCGAGGGCAGCTGGGCGCAACAGCGCCCGGCCGATCGCGAG
CGCCTGCTGTTGTGCCTGGCCGAGCGGCTGGAGGCGCATGGCGAGCAACTGGCGCAGCTGGAGACCCTGAACAACGGCAA
GTCGATCAACCTGTCGCGGGCGCTGGAGGTCGGCGCCTCGGTCGAATTCATCCGCTACATGGCCGGTTGGGCGACCAAGA
TCGAGGGCCGCAGTCTCGACCTGTCGATCGCCGCGGTTCCCGGCGCGCGCTACCGGGCCTACACGGTGCCGGAGCCGGTG
GGGGTGGTGGGGGCGATCGTGCCGTGGAATTTTCCCCTGCTGATGGCGGTCTGGAAGATCGTCCCGGCCCTGGCCTGCGG
CTGCACCGTGGTCCTCAAGCCGGCCGACGAGACGCCGCTGACCGCCCTGCGCCTCGGCCAGTTGTGCCTGGAGGCGGGGA
TTCCGCCAGGGGTGGTGAACATCGTCACCGGCACGGGCGCCGAGGCCGGCGCGGCGCTGGCGGCGCACCCGGGCATCGAC
AAGCTGGCATTCACCGGCTCGACCCCGGTGGGCAAGCTGATCGGGCATGCCGCGGTGGAGAACATGACGCGTTTTTCCCT
CGAACTCGGCGGCAAATCCCCGGTGATCATCCTCGATGACACCAGCCTGGACATGGCTGCCGCCGGTTCCGCCGCCGCGA
TCTTCTTCAACCAGGGGCAAGTCTGTACCGCCGGCTCGCGTCTCTATGTACAGCGCAAGCGCTTCGAGCAGGTGCTCGAG
CGCCTGGCGAGCATCGCCGCCGACCTGAACATCGGCCCCGGTCTGGACCCCGCGGCGCAGATCAATCCGCTGGTATCGGC
CAGGCAGCAGGGCCGTGTGCTGGGAATGATCGAGGGCGGCGTGGCGGAGGGTGCCCGCGTGGTCTGCGGCGGAGCGCGGG
CGGGCGAGACGGGTTTCTACGTACAGCCGACGGTCCTCGCCGACGTCACCCCGCGGATGCAGGTGGTGCGCGAGGAAATC
TTCGGCCCGGTCCTGGTGGCGACGCCCTTCGATGACCTGGACGAGGCCGTGCGCCTGGCCAACGACAGCATCTATGGACT
GGGCGCGAGCATCTGGTCCAACGACCTGCGCCAGGTAATGGACCTGCTGCCGCGGATCAAGGCCGGCACGGTATGGGTGA
ACACCCACAACATGCTCGATCCGTCGATGCCCTTCGGCGGCTTCAAGCAATCCGGCATCGGCCGCGAGATGGGCCATGCG
GCGATCGAGGCGTACACCGAGAACAAGTCGGTGTGCATCGCCTACTGA

Protein sequence :
MSIAIDPSVTAFLRSHHGLLIDGESRPARSGADMPLYDPASGAELARVARAAADDVDLAVAAARRAFEGSWAQQRPADRE
RLLLCLAERLEAHGEQLAQLETLNNGKSINLSRALEVGASVEFIRYMAGWATKIEGRSLDLSIAAVPGARYRAYTVPEPV
GVVGAIVPWNFPLLMAVWKIVPALACGCTVVLKPADETPLTALRLGQLCLEAGIPPGVVNIVTGTGAEAGAALAAHPGID
KLAFTGSTPVGKLIGHAAVENMTRFSLELGGKSPVIILDDTSLDMAAAGSAAAIFFNQGQVCTAGSRLYVQRKRFEQVLE
RLASIAADLNIGPGLDPAAQINPLVSARQQGRVLGMIEGGVAEGARVVCGGARAGETGFYVQPTVLADVTPRMQVVREEI
FGPVLVATPFDDLDEAVRLANDSIYGLGASIWSNDLRQVMDLLPRIKAGTVWVNTHNMLDPSMPFGGFKQSGIGREMGHA
AIEAYTENKSVCIAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-64 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-55 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-57 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-58 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-58 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-58 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-57 42
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_1028 YP_001346414.1 putative aldehyde dehydrogenase VFG0082 Protein 4e-58 42