|
Name : Asuc_0345 (Asuc_0345) Accession : YP_001343658.1 Strain : Actinobacillus succinogenes 130Z Genome accession: NC_009655 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 389981 - 392557 bp Length : 2577 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGCCGAATTTTGACGCTCATACGCCGATGATGAAACAATATCTGACCATCAAAGCGGAGAATCCCGATATTTTGTTGTT TTATCGTATGGGCGATTTTTACGAAATGTTTTATGACGACGCTAAAAAAGCGGCGGCGTTGTTGGATATTTCACTGACTA AACGCGGGCAATCCGCGGGGCGGCCTATTCCTATGGCGGGTGTGCCTTATCATGCGGTGGAAGGTTATCTGGCGAAACTG GTGCAACTGGGGGAATCCGTCGCTATTTGTGAACAGATTGGCGATCCCGCCGCCAGTAAAGGGCCGGTGGAACGTAAAAT CGTGCGAATTGTCACGCCGGGTACCGTCAGCGACGAAAATCTATTGCCGGAACGGCAGGATAACCTGTTGGTGGCGGTGT ATCAGGAAAAAGACCGTTTCGGTTTGGCGTCGCTGGATATGTCTTCCGGACGGTTTCAGATTGCGGAAGCGGAAAATGCG GAAACACTGCACGCAGAATTACAACGTTTACAGCCGGCGGAATTGCTTTATAGCGAAGATTTTAGCGAAATGGCAATTAT CGAACAGACAAAAGGTTTGCGCCGTCGCCCTATTTGGGAATTCGAATTGGGTACCGCCGTGCAGTTGCTGAACCGCCAGT TCGGTACCAAAGATTTAAAAGCTTTCGGCGTAGAAAAAGCCGTTTTAGGTCTATGCGCGGCGGGTTGTCTGTTTCAATAT GCCAAAGAAACCCAACGCACCGCATTGCCGCATATTAAAAGCATCAGTTTGGTACAAAATAGCGATACGGTGCAGTTGGA CGCCGCCACCCGCCGCAATCTGGAATTAACTCGGAATTTGAGCGGCGGCACGGAAAATACGCTGGCATCGGTGCTGGATA AATGTGTCACGCCGATGGGCAGTCGCTTGCTAAAACGCTGGATCCATCAACCTATTCGTAAAATCCAAAAATTACGGCAA CGGCAACAAACCATCGCCGCTATTTTGCAGGATGATTTAATCGATGAGCTGCAACCGCTGTTACGGCAAGTGGGCGATAT GGAACGGATTTTAGCGCGGGTGGCCTTGCGAACGGCGCGTCCGCGCGATTTAACCCGCCTGAGAACGGCGTTGGAACAGC TTCCGCAATTGCAGCAAATAATCAAAACTTTGCAAAATCTGACCGCACTATCCCAACCGATGGGAGAATTTGCCGAACTT TGCGATTTATTACAGCGAGCCATTATTGATTCGCCTCCGTTGCTGATTCGGGACGGCGGCGTAATTGCACCGGGTTATCA TGCGGAACTGGACGAATGGCGTTCGCTGGCGGACGGTGCTACTCAATATTTGGCAGATCTGGAACGGCGCGAACGGGAAA GTACGGGTATTGACACCCTAAAAATAGGGTATAATGCGGTACACGGTTATTATATTCAAATCAGTCAGGGACAGGCACAT AACGCGCCGATGCATTACGTGCGCCGGCAAACCCTGAAAAATGCCGAACGTTACATTATCCCCGAACTGAAAACCTATGA AGATAAAGTGCTGAAAGCCAAAGGTGCCGCTTTAGCATTAGAGAAACAGCTTTATGAGGAGATTTTTGACCAACTGCTTC CTCATTTGGCCGCCCTGCAGTTATCCAGTATGACCTTGGCGGAACTGGATGTGCTGACTAATCTGGCGGAACGGGCGGAA ACCCTGAATTACGTTTGTCCCGAATTCAGCCCGGAAATCGGCGTGGAAATTCAAAACGGCCGTCATCCGGTGGTGGAACA GGTATTGAAAGAACCGTTTATCGCCAACCCGGTCTGTCTTAATCCGCAACGCCGTTTATTGGTGATTACCGGTCCGAATA TGGGCGGGAAAAGTACTTATATGCGTCAAACGGCATTGATTACGTTAATGGCGTATATGGGCGGTTTCGTTCCGGCGGAA CGAGCGGTGATCGGACCGATCGACCGCATATTTACTCGTATCGGTGCCAGTGACGATTTGGCGTCCGGTCGTTCCACGTT TATGGTGGAAATGACGGAAATGGCGAATATTCTGCATCAGGCCACTGCTGACAGTTTGGTGCTGATTGACGAAATCGGAC GAGGGACCTCCACATACGACGGTTTGTCGCTGGCTTGGGCGTGTGCGGAATGGCTGGCGAAGAAATTGCGTTCGCTCACA CTGTTCGCCACCCATTATTTTGAGTTAACCGTGTTGCCCGAACAGTTTGCCGGTACGGCAAACGTGCATTTGGATGCGCT GGAACATGACAACACTATCGCTTTTATGCATGCGGTGCAGGACGGCGCGGCGAGTAAAAGTTACGGTTTAGCCGTGGCGG CGTTAGCGGGCGTGCCGCAGCAAGTGATTAAACTGGCGAAACAAAAACTGGCGCAATTGGAAAAATTGTCGGCGCAAAGT GCGGATCAAAAACTACAGGATTTAAGAACTCTTCATCAAATGCAGGGCGAACTGGCATTGATGGAAGAAGACGACGGCAA AAATGCGGCGCTTGAAATGCTGGAAAAGCTCGACCCTGACGAACTCAGCCCGAAACAGGCGCTGGCTTATTTGTATCAAT TAAAAACGTTACTTTAG Protein sequence : MPNFDAHTPMMKQYLTIKAENPDILLFYRMGDFYEMFYDDAKKAAALLDISLTKRGQSAGRPIPMAGVPYHAVEGYLAKL VQLGESVAICEQIGDPAASKGPVERKIVRIVTPGTVSDENLLPERQDNLLVAVYQEKDRFGLASLDMSSGRFQIAEAENA ETLHAELQRLQPAELLYSEDFSEMAIIEQTKGLRRRPIWEFELGTAVQLLNRQFGTKDLKAFGVEKAVLGLCAAGCLFQY AKETQRTALPHIKSISLVQNSDTVQLDAATRRNLELTRNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRKIQKLRQ RQQTIAAILQDDLIDELQPLLRQVGDMERILARVALRTARPRDLTRLRTALEQLPQLQQIIKTLQNLTALSQPMGEFAEL CDLLQRAIIDSPPLLIRDGGVIAPGYHAELDEWRSLADGATQYLADLERRERESTGIDTLKIGYNAVHGYYIQISQGQAH NAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEEIFDQLLPHLAALQLSSMTLAELDVLTNLAERAE TLNYVCPEFSPEIGVEIQNGRHPVVEQVLKEPFIANPVCLNPQRRLLVITGPNMGGKSTYMRQTALITLMAYMGGFVPAE RAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATADSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKLRSLT LFATHYFELTVLPEQFAGTANVHLDALEHDNTIAFMHAVQDGAASKSYGLAVAALAGVPQQVIKLAKQKLAQLEKLSAQS ADQKLQDLRTLHQMQGELALMEEDDGKNAALEMLEKLDPDELSPKQALAYLYQLKTLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Asuc_0345 | YP_001343658.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 70 |
