Gene Information

Name : Asuc_2014 (Asuc_2014)
Accession : YP_001345295.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2218706 - 2221276 bp
Length : 2571 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: msu:MS1783 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAACATCGATAAATTTACCACCAAATTCCAACAAGCCTTAGGCGAAGCGCAATCCTTAGCTTTAGGAAAAGATAATCA
ATTTATAGAACCCGCCCATTTGTTGACCGCACTTTTGAATCAACAAGACGGTTCCATTGCGCCGATTCTAACGGCAAGCG
GCGCTAATGTGGCGACGTTGCGCAGCGAATTAAATGCGGAAATCAGCAAATTGCCGCAAGTTTCCGGTAACGGAGGCGAT
GTACAGATTTCCCGCCAGTTAGTGAATTTACTGAACTTATGCGACAAAATCGCACAACGCCAGCACGATAAATTTATTTC
CAGCGAAATTTTCTTACTCGCCATATTCGAAGAAAAAGGTAGTCTGGCAGAAATACTGCGTAAGTGCGGTGCCAAAAAAG
AAAGTTTAGAGGCAGCCATTAAACATGTGCGCGGAGGGCAAAACGTGAACGATCAAAATGCCGAAGACAGTCGTCAGGCA
CTGGAAAAATACACTATCGATTTAACCGAACGGGCGGAAAGCGGCAAGCTCGACCCGGTAATCGGTCGTGACGACGAAAT
CCGTCGCGCTATTCAGGTGCTGCAACGTCGTACCAAAAACAATCCGGTACTAATCGGCGAACCGGGTGTCGGTAAAACCG
CCATTGTAGAAGGTTTGGCGCAACGCATTGTAAACGGTGAAGTGCCGGAAGGCTTAAAAGGCAAACGTGTTTTGTCCTTA
GATATGGGAGCCTTGATTGCCGGCGCCAAATACCGCGGTGAATTCGAAGAGCGGTTGAAAGCCGTGTTAAAAGAACTGGC
ACAGGAAGAAGGTTCGGTGATTTTATTCATCGACGAAATTCATACAATGGTGGGCGCAGGTAAAACAGACGGCGCAATGG
ATGCGGGCAACCTGCTGAAACCATCCCTTGCCCGCGGTGAATTGCACTGTGTCGGCGCCACTACTTTAGACGAATACCGC
CAATACATCGAAAAAGATGCGGCGTTGGAACGTCGTTTCCAAAAAGTATTCGTGGGCGAACCGAGCGTAGAAGATACCAT
CGCCATTTTGCGCGGTTTACAGGAACGTTACGAATTACACCATCACGTGGAAATTACCGACCCGGCAATCGTTGCGGCGG
CGACCCTTTCTCATCGTTACATTTCCGATCGCCAGCTGCCGGATAAAGCCATCGATTTAATCGACGAAGCAGCATCCAGC
ATCCGGATGGAAATAGACAGCAAACCGTTACCGTTGGATAAACTGGAACGCCGCATTATTCAGTTAAAACTGGAACAACA
GGCGCTGAAGAAAGAGGACGACGAAGCCAGCCGTAAGCGTTTGGAAATGCTGGAAAAAGAACTGGCGGAAAAAGAACGTG
AATACGCGGAACTGGAAGAAGTATGGAAAAGCGAAAAAGCCGCGTTATCCGGTACGCAACATATTAAAGCCGAACTGGAA
AATGCCCGTACCCAGATGGAACAGGCGCGCCGAGCCGGTGATTTGAACAAGATGTCCGAATTGCAGTACGGTACCATTCC
GGCATTGGAAAAACAACTTGCCGACGCCGATAAATCCGAAGGCAAGGAAATGAAACTGTTGCGTTATCGCGTTACCGACG
AAGAAATCGCCGAAGTGCTTTCCCGCGCCACCGGTATTCCGGTTTCCCGTATGATGGAAGGTGAAAAAGAAAAACTGTTG
CGTATGGAACAGGAATTGCACAAACGCGTAGTGGGACAAAGCGAAGCGGTTGAAGCGGTGGCGAATGCCATTCGTCGTAG
CCGGGCAGGATTATCCGATCCGAATCGCCCGATCGGTTCTTTCCTGTTCTTAGGTCCGACCGGGGTAGGTAAAACCGAAC
TTTGCAAAACCTTGGCAAACTTTATGTTCGACGACGAAAACGCCATGGTACGTATCGATATGTCCGAATTTATGGAAAAA
CACAGCGTATCCCGTTTAGTCGGCGCGCCTCCGGGTTATGTGGGCTATGAAGAAGGCGGTTACTTAACCGAAGCTGTCCG
CCGCCGTCCATACTCTGTCATCTTATTAGATGAAGTGGAAAAAGCGCACCACGATGTGTTCAACATATTATTGCAGGTTT
TAGACGACGGACGTTTAACCGACGGACAAGGCCGCACCGTGGATTTCCGCAACACAGTGGTTATTATGACCTCTAATCTG
GGTTCCGATTTAATTCAGGAAAACCGCAGCCTAGGTTATGAAGGCATGAAAGAAATCGTAATGTCGGTGGTAGGACAACA
TTTCCGCCCGGAATTCATCAACCGTATTGACGAAACGGTAGTCTTCCATCCGTTAGCCAAAGAAAACATCAAAGCCATTG
CCCAAATTCAACTGGCTCGTTTGGCAAAACGTATGGCAGAACACGGTTATCAGATTTCCTTCAGCGATGCGGCACTGGAT
TTCATCAGCGAAGTGGGCTACGACCCGATTTACGGCGCACGTCCGTTAAAACGGGCTATCCAGCAGGAAATCGAAAATCC
GTTAGCCAACGAAATCCTGTCCGGTAAATTATTACCAAGCAAACCGGTCACGGTGGATTATCAAGACGGTAAAATTGCGG
CAAAACAATAA

Protein sequence :
MNIDKFTTKFQQALGEAQSLALGKDNQFIEPAHLLTALLNQQDGSIAPILTASGANVATLRSELNAEISKLPQVSGNGGD
VQISRQLVNLLNLCDKIAQRQHDKFISSEIFLLAIFEEKGSLAEILRKCGAKKESLEAAIKHVRGGQNVNDQNAEDSRQA
LEKYTIDLTERAESGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSL
DMGALIAGAKYRGEFEERLKAVLKELAQEEGSVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVGEPSVEDTIAILRGLQERYELHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPLPLDKLERRIIQLKLEQQALKKEDDEASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRAGDLNKMSELQYGTIPALEKQLADADKSEGKEMKLLRYRVTDEEIAEVLSRATGIPVSRMMEGEKEKLL
RMEQELHKRVVGQSEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDDENAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQENRSLGYEGMKEIVMSVVGQHFRPEFINRIDETVVFHPLAKENIKAIAQIQLARLAKRMAEHGYQISFSDAALD
FISEVGYDPIYGARPLKRAIQQEIENPLANEILSGKLLPSKPVTVDYQDGKIAAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-165 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asuc_2014 YP_001345295.1 ATPase VFG2076 Protein 5e-108 42