Gene Information

Name : Asuc_1880 (Asuc_1880)
Accession : YP_001345166.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2072148 - 2072627 bp
Length : 480 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: msu:MS0585 single-stranded DNA-binding protein

DNA sequence : 
ATGGCAGGCGTTAATAAAGTTATCATCGTTGGTCGTTTAGGAAACGACCCTGAAATTCGCACCATGCCAAACGGAGAAGC
CGTTGCCAATATCAGCGTAGCGACCAGTGAAAGCTGGAACGATCGTAATACCGGCGAACGTCGTGAAGTGACGGAATGGC
ACCGTATCGTATTCTACCGCCGTCAAGCGGAAATCGTAGGCGAATATTTACGCAAAGGCTCGCAAATTTACGTGGAGGGC
CGTTTACGTACGCGTAAATGGCAGGATCAAAACGGGCAGGATCGCTACACCACTGAAATTCAGGGCGATGTCATGCAAAT
GCTGGACAGCCGCAACAGCCAAGGCGGTGATTTTGCACCGCAAAACACAGCGCCACAACAATATTCCCGTTCATCGGCTC
CGCGTCAACAAACCGCACCTAAACCGGCAGCTCAGCCGGAACCGCCAATGGATAATTTTGACGACGATATTCCGTTTTAA

Protein sequence : 
MAGVNKVIIVGRLGNDPEIRTMPNGEAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEIVGEYLRKGSQIYVEG
RLRTRKWQDQNGQDRYTTEIQGDVMQMLDSRNSQGGDFAPQNTAPQQYSRSSAPRQQTAPKPAAQPEPPMDNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 6e-49 71
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 9e-38 55
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-37 55
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-37 55
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 3e-30 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asuc_1880 YP_001345166.1 single-strand binding protein VFG0576 Protein 1e-36 54