Gene Information

Name : rdgC (Asuc_1860)
Accession : YP_001345146.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2047177 - 2048085 bp
Length : 909 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTATTGGTTTAAAAATGCGATGATTTATCGCCTGACAAAAAAGCTGGATTGGTCTGAAGAAGCATTACAGCAGAATTT
GACGCAAAATGCCTATCATCCGTGCGGACAGTCGGATATGAGCAGATTCGGTTGGTCAACACCGTTGCGGGGGGCTGAAT
TGCTGCACTTTTCCGTAGGGAAGCAGATTTTATTGGTGGCGCATAAAGAAGAGAAAATCATTCCGAGCCACGTTGTGAAA
CGGGAATTAGACAATCGAATCGATGAACTGGAACAGAAAGAAAACCGTAAACTGAAAAAAACCGAAAAACAGGCGCTGAA
AGACGATGTGGTTTCCGTACTGCTACCGCGCGCATTCAGTAAAAATCAGCAAACGGCAATTTGGATTAATACGGAAACGA
ATTTAATTTATATCGACGCGGCGTCGAGCAAACGGGCGGAAGATGTATTGGCGTTATTGCGTAAATCATTAGGCTCGCTA
CCGGTGGTACCGCTCGCTTTTGCTAACGAACCGGCGTTGATGATGACAAACTGGATCGCACGAAATGAAATGCCGCAATA
TTTGACCGCACTTGAAGAAGCGGAACTTAAAGCGGCGGACGATAAAGGTATCATCCGCTGCAAAAACCAACCTTTGGATA
GCGAAGAAATCTTATCTCATTTAGAAAAAGGCAAATTCATTACCAAGTTAGCGCTGGATTGGGAAACGCATTTAAGTTTT
GTTTTAAATGATGACGGGACCTTAAAACGCTTGAAATTCGCCGATAATATCCGCGAAAAAAATGACGACATTCTGAAAGA
AGATTATGCTCAGCGTTTTGATGCGGATTTTATTCTGATGACGGGCGAATTAACCGCATTGACGGAAAACCTGCTGGACG
ATTTAGGCGGGGAAAAAACGCGTCTGTAG

Protein sequence :
MYWFKNAMIYRLTKKLDWSEEALQQNLTQNAYHPCGQSDMSRFGWSTPLRGAELLHFSVGKQILLVAHKEEKIIPSHVVK
RELDNRIDELEQKENRKLKKTEKQALKDDVVSVLLPRAFSKNQQTAIWINTETNLIYIDAASSKRAEDVLALLRKSLGSL
PVVPLAFANEPALMMTNWIARNEMPQYLTALEEAELKAADDKGIIRCKNQPLDSEEILSHLEKGKFITKLALDWETHLSF
VLNDDGTLKRLKFADNIREKNDDILKEDYAQRFDADFILMTGELTALTENLLDDLGGEKTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 8e-66 48