Gene Information

Name : Asuc_1821 (Asuc_1821)
Accession : YP_001345107.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 1997524 - 1998294 bp
Length : 771 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0794 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACAATAGAAATTCGAGATATTTGCAAGCAGTACGGTGATAGAACTGTGGTGGATAATGTGTCCGTCAGCATTCCGCA
GGGCAAAATTACCTCGTTTATCGGCCCGAACGGAGCGGGGAAAAGTACCATACTGTCTATTATGAGTCGCTTGATTTCTC
CTGAATCCGGCGAAGTGTTATTGAACGGCGAATCCTTAATGTCGCAAAAGAGCAGTGATATTGCCAAGCGGTTATCGATT
TTAAAGCAATCGAACCACTTTAGTTTGCGCTTAACGGTGGAAGATTTGGTGGCGTTCGGGCGATTCCCCTATTCCAAAGG
AAATCTTACCAAAACCGACCGCACTTTTATTGATAATGCTATCGGTTATATGAATTTAGAGGCGTTTCGCGGTCAGTATA
TTGATAAGTTAAGCGGCGGACAGCGTCAGCGCGCTTATATCGCCATGACATTGGCACAGGATACGGATTATATCCTGTTG
GACGAGCCCTTGAATAATCTGGATATGAAACATTCCGTGCAGATTATGCAGGTACTCCGCAAACTGGTGTCCGAGTTAGG
TAAAACCGTGGTGATTGTGATTCATGACATCAATTTTGCTTCCTGCTATTCGGATTTCATTATCGCCATGAAAAACGGAA
AGTTGGTCGAACAGGGCGCGGTAGACGAAATTATGCGAAGCAGCGTATTACAGAAAATTTATGATATGTTCATTCCTATT
CAGGAAATCGATGGACATAAAATCGCCACCTATTTTAGACATGCCAATTAA

Protein sequence : 
MTIEIRDICKQYGDRTVVDNVSVSIPQGKITSFIGPNGAGKSTILSIMSRLISPESGEVLLNGESLMSQKSSDIAKRLSI
LKQSNHFSLRLTVEDLVAFGRFPYSKGNLTKTDRTFIDNAIGYMNLEAFRGQYIDKLSGGQRQRAYIAMTLAQDTDYILL
DEPLNNLDMKHSVQIMQVLRKLVSELGKTVVIVIHDINFASCYSDFIIAMKNGKLVEQGAVDEIMRSSVLQKIYDMFIPI
QEIDGHKIATYFRHAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-38 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-41 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-41 41
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asuc_1821 YP_001345107.1 ABC transporter-like protein BAC0164 Protein 7e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asuc_1821 YP_001345107.1 ABC transporter-like protein VFG0925 Protein 1e-39 42
Asuc_1821 YP_001345107.1 ABC transporter-like protein VFG1042 Protein 6e-39 41