Gene Information

Name : Asuc_1810 (Asuc_1810)
Accession : YP_001345096.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Unknown
Product : Na+ antiporter NhaC
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 1987079 - 1988434 bp
Length : 1356 bp
Strand : +
Note : PFAM: Gluconate transporter; Citrate transporter; Na+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0701 predicted permease

DNA sequence :
ATGTTAACCAATGCTGTTGTTATCTCAATTATCGTACTGCTTATATTAAGCTTGATGCGAATCAATGTCGTTATCGCACT
TATTATCTCGGCGTTAACCGCAGGATTAACCGGCGGCTTAGGCATAACCAAAACCATTGAAACCTTCACCGGCGGATTGG
GCGGCGGTGCCGAAGTAGCTATGAACTATGCGATCCTCGGTGCGTTTGCTATCGCAATTTCCAGATCCGGTATTACGGAT
TTACTGGCGTTCAAAGTAATTAAACGCTTAGGTAAAACACCTACCGGGAATTCTGTCGCCGGTTTTAAATATTTCACTTT
AGCGGTATTGCTGGCGTTCGCCATTTCCTCGCAAAACCTGTTACCGGTGCACATCGCCTTTATCCCTATCGTTGTACCGC
CGTTATTAAGTATTTTCAATCGGTTAAAAATCGACCGCCGAGCCGTCGCCTGTGTGCTGACGTTCGGATTAACCGCCACT
TATATGTATTTGCCGGTGGGTTTCGGTAAAATTTTTATTGAAAGCATCCTGGTAAAAAACATCAATGAAGCCGGCGCCAC
ATTAGGTCTGCACACTAACGTGAGTGAAGTGTCCATGGCAATGTCCATTCCTGTGATCGGTATGTTTTTAGGTTTATTAA
CGGCAATTTTTATTACTTACCGAAAACCGCGCACATACCAAGTACATATCGAAGAACCGACTACGGCGGAAATCGAACAA
CATATCGCAAAAATCAAACCTTTCCATGTGGGAGTGAGTTTAACGGCAATCTTCGTCACCTTCAGTTTGCAGTTATTCAC
CAGTTCGACCATTATCGGCGGGTTGGCGGGTTTGGTGATTTTCGGCGTATGCGGTGTTTTCCGTTTGAAAGAAAGTAACG
ATATCTTCCAACAGGGATTACGCTTAATGGCGATGATCGGCTTCGTGATGATCGCCGCTTCCGGTTTCGCCAATGTAATT
AACGAAACCGGCGGCGTCACGCAATTAGTCAATACCTTTAGCCAAGGCTTAGGTACCGGCAACAAAGGCGTTGCCGCATT
CCTGATGTTATTGGTAGGTTTATTTATTACCATGGGTATCGGTTCCTCTTTCTCTACCGTGCCGATTATCACTTCCATTT
ACGTACCCTTATGCCTTGCTCTCGGCTTTTCACCGCTTGCTACGGTTTCTATCGTCGGTGTGTCGGCTGCTTTGGGTGAT
GCGGGTTCACCGGCTTCGGATTCCACATTGGGTCCGACCTCCGGTTTGAATATTGACGGCAAACACGATCACATATGGGA
CAGCGTAGTGCCCACCTTCCTGCACTACAATATTCCGTTAATTATATTTGGCTGGATCGCTGCCATGACCTTATAA

Protein sequence :
MLTNAVVISIIVLLILSLMRINVVIALIISALTAGLTGGLGITKTIETFTGGLGGGAEVAMNYAILGAFAIAISRSGITD
LLAFKVIKRLGKTPTGNSVAGFKYFTLAVLLAFAISSQNLLPVHIAFIPIVVPPLLSIFNRLKIDRRAVACVLTFGLTAT
YMYLPVGFGKIFIESILVKNINEAGATLGLHTNVSEVSMAMSIPVIGMFLGLLTAIFITYRKPRTYQVHIEEPTTAEIEQ
HIAKIKPFHVGVSLTAIFVTFSLQLFTSSTIIGGLAGLVIFGVCGVFRLKESNDIFQQGLRLMAMIGFVMIAASGFANVI
NETGGVTQLVNTFSQGLGTGNKGVAAFLMLLVGLFITMGIGSSFSTVPIITSIYVPLCLALGFSPLATVSIVGVSAALGD
AGSPASDSTLGPTSGLNIDGKHDHIWDSVVPTFLHYNIPLIIFGWIAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 3e-93 54
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 3e-93 54
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-93 54
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-93 54
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 5e-106 53
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 5e-106 53